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The map label for this gene is apl [H]

Identifier: 13474482

GI number: 13474482

Start: 4294986

End: 4295603

Strand: Direct

Name: apl [H]

Synonym: mlr5375

Alternate gene names: 13474482

Gene position: 4294986-4295603 (Clockwise)

Preceding gene: 13474481

Following gene: 13474483

Centisome position: 61.04

GC content: 65.05

Gene sequence:

>618_bases
GTGACCGGTCCGTTGTCGGCCATTCTCGGCTTCGGCCTGTTCGGCGTCTTCTGCCTCGCCTTCACCGAGAAGATCCTGCC
GATCCCGCCCTCGCATGTGCTGCTGCTGTTCCTCGGCATGACGGCGGCGCCGGACAGTTCGATGCTGGCGATCCTGCTGG
CGGTGACGACACTTGCCTCCTTCGCCGGTTGCCTTGTCTGGTATGGGGTTGGCCGCCGGATCGGATTTAACCGTGCCGAC
CGGCTGATCGAACGGGTCGGCAGATATGTCTTCCTGCGCCCGGTAACCTACCGCAAGCTTGGCCAGGCCTATCGCCGCAA
TCATGTCCGGGTGTCGCTGCTGGCGCAGTTCATCCCGACGGTGCGCAACTATCTGCCGATCGCGGCCGGCGCGCTTGGTC
TGCCGGCGCTGCCCTTCGCGATGGCGACGCTGCTGGGCGCCACAATCTGGAATGCAGGCTTCCTCCTGACCGGCTATCTT
TTGCGCGGCAGCGGCCAGGATTCCTTCACGGTGGGCTTGCGCATCATCGTCATTGTCGTGGCGCTGGAGACGGCCTTCAT
GCTTGCATTGCGCTATGGGCCCGCATGGCGGCGGCGCATCAGGCTGGCGCTCGGCTGA

Upstream 100 bases:

>100_bases
AAGTCACGCGGATCGGCCATACCTTTCGCAATTTCCCGCCGGCGACGGTCTACCGCGTCGCCAGGATCAAGACGCTCGGG
ACCTATGACTGGCGCTTCGC

Downstream 100 bases:

>100_bases
GCACCAGTCTCCGGTCATGGGATAAGTTCCGCCGTCGGCTTTCCTTCGCCCGGCCGCCGGTGTTTAGTCCGGCCATGGCC
TTCACCATCCGCCAGTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTGPLSAILGFGLFGVFCLAFTEKILPIPPSHVLLLFLGMTAAPDSSMLAILLAVTTLASFAGCLVWYGVGRRIGFNRAD
RLIERVGRYVFLRPVTYRKLGQAYRRNHVRVSLLAQFIPTVRNYLPIAAGALGLPALPFAMATLLGATIWNAGFLLTGYL
LRGSGQDSFTVGLRIIVIVVALETAFMLALRYGPAWRRRIRLALG

Sequences:

>Translated_205_residues
MTGPLSAILGFGLFGVFCLAFTEKILPIPPSHVLLLFLGMTAAPDSSMLAILLAVTTLASFAGCLVWYGVGRRIGFNRAD
RLIERVGRYVFLRPVTYRKLGQAYRRNHVRVSLLAQFIPTVRNYLPIAAGALGLPALPFAMATLLGATIWNAGFLLTGYL
LRGSGQDSFTVGLRIIVIVVALETAFMLALRYGPAWRRRIRLALG
>Mature_204_residues
TGPLSAILGFGLFGVFCLAFTEKILPIPPSHVLLLFLGMTAAPDSSMLAILLAVTTLASFAGCLVWYGVGRRIGFNRADR
LIERVGRYVFLRPVTYRKLGQAYRRNHVRVSLLAQFIPTVRNYLPIAAGALGLPALPFAMATLLGATIWNAGFLLTGYLL
RGSGQDSFTVGLRIIVIVVALETAFMLALRYGPAWRRRIRLALG

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22367; Mature: 22236

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPLSAILGFGLFGVFCLAFTEKILPIPPSHVLLLFLGMTAAPDSSMLAILLAVTTLAS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
FAGCLVWYGVGRRIGFNRADRLIERVGRYVFLRPVTYRKLGQAYRRNHVRVSLLAQFIPT
HHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH
VRNYLPIAAGALGLPALPFAMATLLGATIWNAGFLLTGYLLRGSGQDSFTVGLRIIVIVV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALETAFMLALRYGPAWRRRIRLALG
HHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TGPLSAILGFGLFGVFCLAFTEKILPIPPSHVLLLFLGMTAAPDSSMLAILLAVTTLAS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
FAGCLVWYGVGRRIGFNRADRLIERVGRYVFLRPVTYRKLGQAYRRNHVRVSLLAQFIPT
HHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH
VRNYLPIAAGALGLPALPFAMATLLGATIWNAGFLLTGYLLRGSGQDSFTVGLRIIVIVV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALETAFMLALRYGPAWRRRIRLALG
HHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]