Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474444

Identifier: 13474444

GI number: 13474444

Start: 4254645

End: 4255037

Strand: Direct

Name: 13474444

Synonym: mlr5326

Alternate gene names: NA

Gene position: 4254645-4255037 (Clockwise)

Preceding gene: 13474443

Following gene: 13474445

Centisome position: 60.47

GC content: 59.54

Gene sequence:

>393_bases
ATGACCTTGGCCAAGAAACTCGTGCTTTTGCTGATGGCGGCCGGAATGCTGCTCGCCGTCTTCCTCGAAAGCGTCCCGGC
GCAGAGCGAAGAGATGAAACACGATATGGCTGGCATGTCGATGGGCGCGACCAGCCCTTCAACCGAAGGCTACAAGGCGG
CGATGGACAAGATGCATGCCGACATGATGGCATCGCAATACACCGGCAATGCCGATATCGATTTCGTCCGCGGCATGATC
CCGCACCATCAGGGCGCCATCGACATGGCCAAGGTCGAGCTTGCCAACGGCAAAGACCCGGAAATCCGCAAGCTCGCCGA
AGGCGTCATTGCTGCGCAGGAAGCCGAGATCAAGCAGATGCAGGACTGGCTCGCCGCGCATCCGGTGAAGTGA

Upstream 100 bases:

>100_bases
CCTGTCCTCGGTCTCCGTCATTGCCAACGCATTGCGGCTGCGGACGTTGAAACTCTGATCCAAACCCCCAAATACGAACC
CAACCAACAGGAGACCATGA

Downstream 100 bases:

>100_bases
GACTTTCGCGACGGGGAGATTTGGGCGAGAAACGCCTTTGGATTTCTCGCCTGCCCTGTGATGCGATTCGGCCTCGAACG
GAGCCTGCCATGCCATCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTLAKKLVLLLMAAGMLLAVFLESVPAQSEEMKHDMAGMSMGATSPSTEGYKAAMDKMHADMMASQYTGNADIDFVRGMI
PHHQGAIDMAKVELANGKDPEIRKLAEGVIAAQEAEIKQMQDWLAAHPVK

Sequences:

>Translated_130_residues
MTLAKKLVLLLMAAGMLLAVFLESVPAQSEEMKHDMAGMSMGATSPSTEGYKAAMDKMHADMMASQYTGNADIDFVRGMI
PHHQGAIDMAKVELANGKDPEIRKLAEGVIAAQEAEIKQMQDWLAAHPVK
>Mature_129_residues
TLAKKLVLLLMAAGMLLAVFLESVPAQSEEMKHDMAGMSMGATSPSTEGYKAAMDKMHADMMASQYTGNADIDFVRGMIP
HHQGAIDMAKVELANGKDPEIRKLAEGVIAAQEAEIKQMQDWLAAHPVK

Specific function: Unknown

COG id: COG3544

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14058; Mature: 13926

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.8 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.1 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAKKLVLLLMAAGMLLAVFLESVPAQSEEMKHDMAGMSMGATSPSTEGYKAAMDKMHA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
DMMASQYTGNADIDFVRGMIPHHQGAIDMAKVELANGKDPEIRKLAEGVIAAQEAEIKQM
HHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
QDWLAAHPVK
HHHHHHCCCC
>Mature Secondary Structure 
TLAKKLVLLLMAAGMLLAVFLESVPAQSEEMKHDMAGMSMGATSPSTEGYKAAMDKMHA
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
DMMASQYTGNADIDFVRGMIPHHQGAIDMAKVELANGKDPEIRKLAEGVIAAQEAEIKQM
HHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
QDWLAAHPVK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA