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The map label for this gene is erfK [H]

Identifier: 13474433

GI number: 13474433

Start: 4240741

End: 4241358

Strand: Direct

Name: erfK [H]

Synonym: mlr5313

Alternate gene names: 13474433

Gene position: 4240741-4241358 (Clockwise)

Preceding gene: 13474429

Following gene: 13474443

Centisome position: 60.27

GC content: 60.52

Gene sequence:

>618_bases
ATGCGCATGAAGTCGCTTGCAATAATTGCCGCATTGGCGCTCTCCACGGCCATCGCCGGTTGCAGCACCATCGGCGGGCA
GATCTTCTCCAACGACTACGGCGCGGTGACCGATGCTGGCTACCAACTGCCGCGCGTCCCGATCGAAAAAGTGCCGAGGC
AGTTTCACCGGCAGGAAGTGAACTACGACACCAAGGAAAAGCCGGGCACCATCATCGTCGATACGCAGAACAAGTTCCTC
TACTTTGTCGAGGACGATGGCCGCGCGATCCGCTACGGCATCGGCGTTGGTCGCGAAGGCTTCGAGTGGCACGGCACCGC
CCATATCGCGCTGAAGCGCGAATGGCCAACCTGGACGCCGCCTCGTGAAATGATCAAGCGCCAGCCGGAACTGGCGAAGT
TCGCCGATGGCATGGAACCGGGCCTGAAGAACCCGCTTGGCGCGCGCGCCATGTATCTCTTCAACAAGGGCGGCGACATG
GGCTACCGCCTGCATGGCAGCCCGGAATGGAATTCGATCGGCAAGGCGATGTCGTCTGGCTGTATCCGGCTGATGAACCA
GGACATTATCGATCTCTATGACCGCACCTCGGTCGGCGCCAAGGTCATCGTGATGTGA

Upstream 100 bases:

>100_bases
CATCGTGCGCTTGGCAAGCAAAGCAAATGCCAGCATGAATGAAAGCAAGAAAGCGGCCGACTCGTGCCGCTGACATTTGG
GCAGGGCTCCGGATCACCTC

Downstream 100 bases:

>100_bases
GGACCAGGGTCCCTCGCGGGATCATGGTCAAACGAGAAGACAAGTTTCGTACGCGGACCGTCTAGGCAACAACGGACGTC
CCAAACAGAAAACCGGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRMKSLAIIAALALSTAIAGCSTIGGQIFSNDYGAVTDAGYQLPRVPIEKVPRQFHRQEVNYDTKEKPGTIIVDTQNKFL
YFVEDDGRAIRYGIGVGREGFEWHGTAHIALKREWPTWTPPREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDM
GYRLHGSPEWNSIGKAMSSGCIRLMNQDIIDLYDRTSVGAKVIVM

Sequences:

>Translated_205_residues
MRMKSLAIIAALALSTAIAGCSTIGGQIFSNDYGAVTDAGYQLPRVPIEKVPRQFHRQEVNYDTKEKPGTIIVDTQNKFL
YFVEDDGRAIRYGIGVGREGFEWHGTAHIALKREWPTWTPPREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDM
GYRLHGSPEWNSIGKAMSSGCIRLMNQDIIDLYDRTSVGAKVIVM
>Mature_205_residues
MRMKSLAIIAALALSTAIAGCSTIGGQIFSNDYGAVTDAGYQLPRVPIEKVPRQFHRQEVNYDTKEKPGTIIVDTQNKFL
YFVEDDGRAIRYGIGVGREGFEWHGTAHIALKREWPTWTPPREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDM
GYRLHGSPEWNSIGKAMSSGCIRLMNQDIIDLYDRTSVGAKVIVM

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=144, Percent_Identity=35.4166666666667, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787356, Length=141, Percent_Identity=31.9148936170213, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1787040, Length=139, Percent_Identity=30.2158273381295, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 22854; Mature: 22854

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKSLAIIAALALSTAIAGCSTIGGQIFSNDYGAVTDAGYQLPRVPIEKVPRQFHRQEV
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
NYDTKEKPGTIIVDTQNKFLYFVEDDGRAIRYGIGVGREGFEWHGTAHIALKREWPTWTP
CCCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCCCCCEECCEEEEEEEECCCCCCC
PREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDMGYRLHGSPEWNSIGKAMSSG
HHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHH
CIRLMNQDIIDLYDRTSVGAKVIVM
HHHHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MRMKSLAIIAALALSTAIAGCSTIGGQIFSNDYGAVTDAGYQLPRVPIEKVPRQFHRQEV
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
NYDTKEKPGTIIVDTQNKFLYFVEDDGRAIRYGIGVGREGFEWHGTAHIALKREWPTWTP
CCCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCCCCCEECCEEEEEEEECCCCCCC
PREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDMGYRLHGSPEWNSIGKAMSSG
HHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHH
CIRLMNQDIIDLYDRTSVGAKVIVM
HHHHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]