| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is exoN [H]
Identifier: 13474400
GI number: 13474400
Start: 4205937
End: 4206833
Strand: Direct
Name: exoN [H]
Synonym: mlr5275
Alternate gene names: 13474400
Gene position: 4205937-4206833 (Clockwise)
Preceding gene: 13474399
Following gene: 13474401
Centisome position: 59.78
GC content: 62.65
Gene sequence:
>897_bases ATGAAGAAAATCAGGAAGGCCGTGATACCGGTGGCGGGGCTTGGAACACGGTTCCTGCCGGCGACCAAGTCGATGCCGAA GGAAATGCTCCCGGTGGTCGACAGGCCCGTCGTGCAATATGCGGTGGACGAGGCCTTCGAAGCCGGCATCGAGCACATCG TGTTCGTGACCGGCCGCAACAAGGCGGTCATCGAGGACTATTTCGACCTGCATCCGGAATTGATCGGAACCTTGGAGCAG ACCGGCAAGAAGACCCAGCTGGAGGCGCTCGAAAGCATGCTGCCGGTGGCCGGCGCCACCTCCTTCATCCGCCAGCAATC CCCGCAGGGCCTCGGCCACGCCGTCTGGTGCGCCCGCGAGGTCATCGGCAACGAACCCTTCGCTTTGCTTTTGCCAGACA TGGTCTCCTTCGGCGGGCGCGGCTGTCTGGCCGAAACCGTCGACCTCTATGAGCGCACCGGCGGCAACGTCATCGCCGTC GAGCGTTGTGATCCGAGCGAGACCAACAAATACGGCATTGTCGGCCGCGGCGCCGACATTGGCGGCGGTTTCGAGGTCAC GGCCATGGTCGAAAAGCCGGCCCCGGCCAACGCGCCGTCAAATTTCTACATCAACGGCCGCTACATCCTGCAGCCTGAGA TCTTCGCGCTGCTGGGCAACCAGCAGCGTGGCGCCGGCAACGAGATCCAGCTGACGGACGCCATGGTTCGCCTGTCGAAG GACCAGCCGTTCTTTGCCCAGCCTTTCCTGGGCCGCATGTTCGACTGCGGATCCAAGGAAGGCTTCATCCAGGCCAACAT CGCCTTCGCGCTGGCGCGCAACGACATGAAGGGCCCGGTTTTCGAGATGCTTCAGGAGTTCGTCCGGTCGCATGAACGTC AGGAAGAAGCCGCATAA
Upstream 100 bases:
>100_bases AGTTTGCCGTGGGGGCGGGGAGGTGAAGATGCAGGCACATGGAGGGGTTTTTCGTGGCCTGTGAATGGACTGAAGTCGAT CTCCTCAGAAGGAATTTGCG
Downstream 100 bases:
>100_bases TGTCCATCTTTCGGGAGTATTGCCGGATGGCTGGCGGCGAGGGGCCGACAGGCCCCCGTCGTCTGGCATGAAGCTTGCGT TGCTTCTTGGCAATGCTCCC
Product: UTP-glucose-1-phosphate uridylyltransferase exoN
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKKIRKAVIPVAGLGTRFLPATKSMPKEMLPVVDRPVVQYAVDEAFEAGIEHIVFVTGRNKAVIEDYFDLHPELIGTLEQ TGKKTQLEALESMLPVAGATSFIRQQSPQGLGHAVWCAREVIGNEPFALLLPDMVSFGGRGCLAETVDLYERTGGNVIAV ERCDPSETNKYGIVGRGADIGGGFEVTAMVEKPAPANAPSNFYINGRYILQPEIFALLGNQQRGAGNEIQLTDAMVRLSK DQPFFAQPFLGRMFDCGSKEGFIQANIAFALARNDMKGPVFEMLQEFVRSHERQEEAA
Sequences:
>Translated_298_residues MKKIRKAVIPVAGLGTRFLPATKSMPKEMLPVVDRPVVQYAVDEAFEAGIEHIVFVTGRNKAVIEDYFDLHPELIGTLEQ TGKKTQLEALESMLPVAGATSFIRQQSPQGLGHAVWCAREVIGNEPFALLLPDMVSFGGRGCLAETVDLYERTGGNVIAV ERCDPSETNKYGIVGRGADIGGGFEVTAMVEKPAPANAPSNFYINGRYILQPEIFALLGNQQRGAGNEIQLTDAMVRLSK DQPFFAQPFLGRMFDCGSKEGFIQANIAFALARNDMKGPVFEMLQEFVRSHERQEEAA >Mature_298_residues MKKIRKAVIPVAGLGTRFLPATKSMPKEMLPVVDRPVVQYAVDEAFEAGIEHIVFVTGRNKAVIEDYFDLHPELIGTLEQ TGKKTQLEALESMLPVAGATSFIRQQSPQGLGHAVWCAREVIGNEPFALLLPDMVSFGGRGCLAETVDLYERTGGNVIAV ERCDPSETNKYGIVGRGADIGGGFEVTAMVEKPAPANAPSNFYINGRYILQPEIFALLGNQQRGAGNEIQLTDAMVRLSK DQPFFAQPFLGRMFDCGSKEGFIQANIAFALARNDMKGPVFEMLQEFVRSHERQEEAA
Specific function: May Play A Role In Stationary Phase Survival. [C]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=282, Percent_Identity=42.9078014184397, Blast_Score=216, Evalue=1e-57, Organism=Escherichia coli, GI1788355, Length=285, Percent_Identity=39.2982456140351, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1788351, Length=267, Percent_Identity=25.8426966292135, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1790224, Length=265, Percent_Identity=25.6603773584906, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32639; Mature: 32639
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRKAVIPVAGLGTRFLPATKSMPKEMLPVVDRPVVQYAVDEAFEAGIEHIVFVTGRN CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCC KAVIEDYFDLHPELIGTLEQTGKKTQLEALESMLPVAGATSFIRQQSPQGLGHAVWCARE CCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHH VIGNEPFALLLPDMVSFGGRGCLAETVDLYERTGGNVIAVERCDPSETNKYGIVGRGADI HHCCCCCEEECCHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCC GGGFEVTAMVEKPAPANAPSNFYINGRYILQPEIFALLGNQQRGAGNEIQLTDAMVRLSK CCCEEEEEEEECCCCCCCCCCEEECCEEEECCHHHHHCCCCCCCCCCEEEHHHHHHHHCC DQPFFAQPFLGRMFDCGSKEGFIQANIAFALARNDMKGPVFEMLQEFVRSHERQEEAA CCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIRKAVIPVAGLGTRFLPATKSMPKEMLPVVDRPVVQYAVDEAFEAGIEHIVFVTGRN CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCC KAVIEDYFDLHPELIGTLEQTGKKTQLEALESMLPVAGATSFIRQQSPQGLGHAVWCARE CCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHH VIGNEPFALLLPDMVSFGGRGCLAETVDLYERTGGNVIAVERCDPSETNKYGIVGRGADI HHCCCCCEEECCHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCC GGGFEVTAMVEKPAPANAPSNFYINGRYILQPEIFALLGNQQRGAGNEIQLTDAMVRLSK CCCEEEEEEEECCCCCCCCCCEEECCEEEECCHHHHHCCCCCCCCCCEEEHHHHHHHHCC DQPFFAQPFLGRMFDCGSKEGFIQANIAFALARNDMKGPVFEMLQEFVRSHERQEEAA CCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]