Click here to switch to the map view.

The map label for this gene is 13474333

Identifier: 13474333

GI number: 13474333

Start: 4130483

End: 4131544

Strand: Direct

Name: 13474333

Synonym: mlr5196

Alternate gene names: NA

Gene position: 4130483-4131544 (Clockwise)

Preceding gene: 13474331

Following gene: 13474339

Centisome position: 58.7

GC content: 66.57

Gene sequence:

>1062_bases
TTGTCGCTGCCGGCGGCATCCCAGGCTGCCGTTCAGCCGGCAATCGATACCAGGGAGGCCGCCGCGACGCTCGCGGCATT
GAAGTCGCCGAAGCGCCAGCGTCCATTGATCGCCATCATCGGCATCAACGACGGCACCGAAACCACTGATTATCTCATGC
CTTACGGCATCCTGCGGCGCGCCGATGTCGCCGATGTCGTGGCGCTGGCGACGCGGCCCGGACCGATGAGACTGCACCCG
GCCTTGCAGATCGAGCCCGATGCGACGACGACGGCATTCGACGCCGAGCACCCGGACGGCGCCGACTACGTCATCGTCCC
GGCCATGATGCGCGATGACGACGCCGACGTGCTGGAATGGATCAGGAGCCAGGCGGCCAAGGGCGCCATGGTGATCGGCA
TCTGCGCTGGCGCCAAAGTGGTCGGCGCCAGCGGGTTGTTGGACGGCAAGCGGGCGACGACCCATTGGTATTCCGTCGGC
GAGCTCCGCGAAAAACACCCTACGATTCACTATGTCGCCGACCGGCGCTTCGTCGTCGATCAAGGTGTCGCGACGACAAC
GGGGATCACCGCATCGATGCCGATGATGCTGACCCTGATCGAGGCCATCGCCGGCCGGGACAAGGCCGAAGCCGTCGGCC
GCGATCTGGGCCTGGCGCACTGGGATGCGCGGCATGACAGTGGCGCCTTCAAGTTCACCCGCCCGTTCGCGCTGGCGGCG
ATCGGCAACACGCTTGCCGTCCTGGGGCATGAACAGCTCGGTATCCCGCTGACATCAGGCATGGATGAGGTGTCGCTGGC
CCTGGTCGCCGACGCCTGGTCGCGAACCTATCGCTCGGGCGCGGTCACATTCGCCGGTAAGGACAGCGCGATCGTCAGCC
GTGACGGTCTTCGTATCTTGCCTGACCAGATCGCCACCGACTGGCCGGTGGACCGGTTGGTTCCGGCCACGGCCGATCCG
CGGCCGGCGAGGGCGCTCGACCAGGCGCTTCAAGACATCTCGGCTCGCCACGGTGCACGCACGGCCGACTTCGTCGCCAT
GCAGCTCGAATATCCCCGGTGA

Upstream 100 bases:

>100_bases
GCGTTTCGATCGGAAGGACTGGATCATGAATTTGCGTATCATGCTGTGGAGTGGTCTCGGCGTCGTGGTGGCCCTCCTCG
CATTGGGTGCCGCATGGCTA

Downstream 100 bases:

>100_bases
AAGGGACTGTTGAAGGTCCGGCACCGGCCAGGCATTCGTTCGTCGCAATTCAGGTCGAATAGCGCTCGGCGAATTCGGAA
ATACGCTGCACCACCGCCTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AraC Family; ThiJ/PfpI Domain-Containing Protein; AraC Family Transcription Regulator; AraC-Family Transcriptional Regulator; ADPA Family Transcriptional Regulator; ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Transcriptional Activator FtrA; ThiJ/PfpI; AraC Family Regulatory Protein; ADPA-Family Transcriptional Regulator; DJ-1/PfpI Family; Transcription Regulator Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein; Transcription Regulator; A-Factor-Responsive Transcriptional Activator; Transcriptional Regulator Arac Family; Transcriptional Regulator SyrB; AraC Transcriptional Regulatory Protein; Transcriptional Regulator DarR; Transcriptional Regulator Protein AraC Family; GATase1_AraC_1 Family Transcriptional Regulator; AraC Family Regulatory Helix-Turn-Helix; Sulfate Permease Andrelated Transporter; AraC Family Transcription Regulator Protein

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSLPAASQAAVQPAIDTREAAATLAALKSPKRQRPLIAIIGINDGTETTDYLMPYGILRRADVADVVALATRPGPMRLHP
ALQIEPDATTTAFDAEHPDGADYVIVPAMMRDDDADVLEWIRSQAAKGAMVIGICAGAKVVGASGLLDGKRATTHWYSVG
ELREKHPTIHYVADRRFVVDQGVATTTGITASMPMMLTLIEAIAGRDKAEAVGRDLGLAHWDARHDSGAFKFTRPFALAA
IGNTLAVLGHEQLGIPLTSGMDEVSLALVADAWSRTYRSGAVTFAGKDSAIVSRDGLRILPDQIATDWPVDRLVPATADP
RPARALDQALQDISARHGARTADFVAMQLEYPR

Sequences:

>Translated_353_residues
MSLPAASQAAVQPAIDTREAAATLAALKSPKRQRPLIAIIGINDGTETTDYLMPYGILRRADVADVVALATRPGPMRLHP
ALQIEPDATTTAFDAEHPDGADYVIVPAMMRDDDADVLEWIRSQAAKGAMVIGICAGAKVVGASGLLDGKRATTHWYSVG
ELREKHPTIHYVADRRFVVDQGVATTTGITASMPMMLTLIEAIAGRDKAEAVGRDLGLAHWDARHDSGAFKFTRPFALAA
IGNTLAVLGHEQLGIPLTSGMDEVSLALVADAWSRTYRSGAVTFAGKDSAIVSRDGLRILPDQIATDWPVDRLVPATADP
RPARALDQALQDISARHGARTADFVAMQLEYPR
>Mature_352_residues
SLPAASQAAVQPAIDTREAAATLAALKSPKRQRPLIAIIGINDGTETTDYLMPYGILRRADVADVVALATRPGPMRLHPA
LQIEPDATTTAFDAEHPDGADYVIVPAMMRDDDADVLEWIRSQAAKGAMVIGICAGAKVVGASGLLDGKRATTHWYSVGE
LREKHPTIHYVADRRFVVDQGVATTTGITASMPMMLTLIEAIAGRDKAEAVGRDLGLAHWDARHDSGAFKFTRPFALAAI
GNTLAVLGHEQLGIPLTSGMDEVSLALVADAWSRTYRSGAVTFAGKDSAIVSRDGLRILPDQIATDWPVDRLVPATADPR
PARALDQALQDISARHGARTADFVAMQLEYPR

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37728; Mature: 37597

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPAASQAAVQPAIDTREAAATLAALKSPKRQRPLIAIIGINDGTETTDYLMPYGILRR
CCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCHHHHHH
ADVADVVALATRPGPMRLHPALQIEPDATTTAFDAEHPDGADYVIVPAMMRDDDADVLEW
CCHHHHHHHHCCCCCEEECCCEEECCCCCEEEECCCCCCCCCEEEEEHEECCCCHHHHHH
IRSQAAKGAMVIGICAGAKVVGASGLLDGKRATTHWYSVGELREKHPTIHYVADRRFVVD
HHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCHHEEEHHHHHHHCCCEEEEECCEEEEE
QGVATTTGITASMPMMLTLIEAIAGRDKAEAVGRDLGLAHWDARHDSGAFKFTRPFALAA
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEH
IGNTLAVLGHEQLGIPLTSGMDEVSLALVADAWSRTYRSGAVTFAGKDSAIVSRDGLRIL
HCCCCEEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCEEC
PDQIATDWPVDRLVPATADPRPARALDQALQDISARHGARTADFVAMQLEYPR
CHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
SLPAASQAAVQPAIDTREAAATLAALKSPKRQRPLIAIIGINDGTETTDYLMPYGILRR
CCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCHHHHHH
ADVADVVALATRPGPMRLHPALQIEPDATTTAFDAEHPDGADYVIVPAMMRDDDADVLEW
CCHHHHHHHHCCCCCEEECCCEEECCCCCEEEECCCCCCCCCEEEEEHEECCCCHHHHHH
IRSQAAKGAMVIGICAGAKVVGASGLLDGKRATTHWYSVGELREKHPTIHYVADRRFVVD
HHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCHHEEEHHHHHHHCCCEEEEECCEEEEE
QGVATTTGITASMPMMLTLIEAIAGRDKAEAVGRDLGLAHWDARHDSGAFKFTRPFALAA
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEH
IGNTLAVLGHEQLGIPLTSGMDEVSLALVADAWSRTYRSGAVTFAGKDSAIVSRDGLRIL
HCCCCEEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCEEC
PDQIATDWPVDRLVPATADPRPARALDQALQDISARHGARTADFVAMQLEYPR
CHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA