| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474296
Identifier: 13474296
GI number: 13474296
Start: 4088110
End: 4088577
Strand: Direct
Name: 13474296
Synonym: mlr5153
Alternate gene names: NA
Gene position: 4088110-4088577 (Clockwise)
Preceding gene: 13474294
Following gene: 13474300
Centisome position: 58.1
GC content: 62.18
Gene sequence:
>468_bases ATGGAGATGAAAATGAAAACCAAAATTCATGCAGCGGCGGGCGTCGTCGCGCTCATCACGGTCTCGGCTTTCTGGCTGTC GACGGCCACGGCCGAACTGCTCGGCGATACTGCCGCGATCGCAACGGTCAAGAACTGCGTACTGGCCGGCATGGCGGTGC TCATCCCGGCGATGATCATTGCCGGCGCGTCGGGCTTTTCACTCGGCAAGGGCTGGAAGAGCCCGGTCGTGGCACGCAAG AAGTGGCGCATGCGCATCATCGCCGCCAACGGATTGCTGGTCCTCGTGCCCTCCGCCTTCCTGCTCAGCAGCTTTGCCGC GGCCGGTCGCTTCGACAATTTTTTCATGATCGTCCAGACGATCGAACTGGTAGCCGGCGCAACGAACATCGCATTGCTGT CGCTCAACATGCGCGACGGGCTGTCGCTGCGGCGCAAGCCTCTTCGGCTGACTGCACCAGCGCGGTGA
Upstream 100 bases:
>100_bases CATGTGGTTGGCCAGGAATCCAGCGGATCGTTCCTTCTGAAATGTCATGCCTGCCAGATAATAGTTGAATAGCATGCTAT GCAATGATATATAGCTTGCT
Downstream 100 bases:
>100_bases GATCAGGCTGTGATGTCGACGACGCCGCAGTCGCCGGCCGCGCTGCCGAAGGCGATACGGCGCTCTTCCTTGTCCCACAT CATCGAGGTGATGGCGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MEMKMKTKIHAAAGVVALITVSAFWLSTATAELLGDTAAIATVKNCVLAGMAVLIPAMIIAGASGFSLGKGWKSPVVARK KWRMRIIAANGLLVLVPSAFLLSSFAAAGRFDNFFMIVQTIELVAGATNIALLSLNMRDGLSLRRKPLRLTAPAR
Sequences:
>Translated_155_residues MEMKMKTKIHAAAGVVALITVSAFWLSTATAELLGDTAAIATVKNCVLAGMAVLIPAMIIAGASGFSLGKGWKSPVVARK KWRMRIIAANGLLVLVPSAFLLSSFAAAGRFDNFFMIVQTIELVAGATNIALLSLNMRDGLSLRRKPLRLTAPAR >Mature_155_residues MEMKMKTKIHAAAGVVALITVSAFWLSTATAELLGDTAAIATVKNCVLAGMAVLIPAMIIAGASGFSLGKGWKSPVVARK KWRMRIIAANGLLVLVPSAFLLSSFAAAGRFDNFFMIVQTIELVAGATNIALLSLNMRDGLSLRRKPLRLTAPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16398; Mature: 16398
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMKMKTKIHAAAGVVALITVSAFWLSTATAELLGDTAAIATVKNCVLAGMAVLIPAMII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AGASGFSLGKGWKSPVVARKKWRMRIIAANGLLVLVPSAFLLSSFAAAGRFDNFFMIVQT CCCCCCCCCCCCCCCHHHHHHHEEEEEEECCEEEEECHHHHHHHHHHCCCCCHHHHHHHH IELVAGATNIALLSLNMRDGLSLRRKPLRLTAPAR HHHHHCCCCEEEEEEECCCCCCCCCCCEEECCCCC >Mature Secondary Structure MEMKMKTKIHAAAGVVALITVSAFWLSTATAELLGDTAAIATVKNCVLAGMAVLIPAMII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AGASGFSLGKGWKSPVVARKKWRMRIIAANGLLVLVPSAFLLSSFAAAGRFDNFFMIVQT CCCCCCCCCCCCCCCHHHHHHHEEEEEEECCEEEEECHHHHHHHHHHCCCCCHHHHHHHH IELVAGATNIALLSLNMRDGLSLRRKPLRLTAPAR HHHHHCCCCEEEEEEECCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA