| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474227
Identifier: 13474227
GI number: 13474227
Start: 4012838
End: 4013596
Strand: Direct
Name: 13474227
Synonym: mlr5068
Alternate gene names: NA
Gene position: 4012838-4013596 (Clockwise)
Preceding gene: 13474226
Following gene: 13474229
Centisome position: 57.03
GC content: 65.09
Gene sequence:
>759_bases ATGACCATCGGATTCTTCCGCAATCTGACGAAGCCCAAGGCCACGCCAGTCGTGGAGCGCGAATATTGCGTCGCCGGTCG CACGCTGCCGCTCAAGATCGTCGAGAGCGCCCGCGCACGGCGCCTGACGCTGCGCATCGATTCCGGCGGCCAGGGCCTGC GCATCACCGTGCCGCCCGGCCTGCGCCGTGGCGAGGTGGACAGGTTCCTCGACCGCCATCAGGACTGGCTGGAGCAGCGC CTGGCCAAGGTGCCGACGCGCCCGCAAGTGCGGCCGGGCATCAAGATCCCGATCCGGGGCGTGCCGCACCGCATCGTCCA TGAGCCGTCAAAGCGCGGCACCGTCACCGTGTCGCGCGACGAGCGTGGGCCACTGCTGATCGTCCATGGCGACCGGATAC ATCTGCCGCGCCGTATCGCCGACTTCTTGAAGCGCGAGGCCAAGAAGGAGATCGAGAAGCTGGTGATCAAGCACACCGAG GCGCTCGGCAAGCGCGCCAAGGCGATCCGCTACAAGGACACGTCGAGCCGCTGGGGCTCCTGCACCTCGGAAGGCAATCT CTCCTTCTCCTGGCGCATCATGATGGCGCCGCAGCCTGTTATAAATTACCTCGTGGCGCATGAGGTCGCGCATCTCAAGG AGATGAACCACGGCCCGAAATTCTGGAAATTGTGCGAAAAACTCTGCCCCGACACCGACCGCTGCAAGGACTGGCTGAAG CGCAACGGCGGCGCGCTGCAGGCGATCATGTTCGAGTAG
Upstream 100 bases:
>100_bases CTGTGCGACAAGCCCGATCGTGAAAAAAAACGGCGTCGCGTGAGCGGCGCCGTTTCTTTTTTGTTCTAGTCGTTTTTCTC GAATCGCGTATCGTCCCGCC
Downstream 100 bases:
>100_bases TCAATCGTCATTCGCGGCGTTGAGTTCCTCGGGGCGCAGCCCTTCATCGCCATGATGCGGCCAGGGCAGGAAATTCCGGT CAAATTCATCGCTGCCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Zinc Protease; Zinc Metallopeptidase-Like Protein; Hydrolase; Zinc Metallopeptidase Protein; Protease
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTIGFFRNLTKPKATPVVEREYCVAGRTLPLKIVESARARRLTLRIDSGGQGLRITVPPGLRRGEVDRFLDRHQDWLEQR LAKVPTRPQVRPGIKIPIRGVPHRIVHEPSKRGTVTVSRDERGPLLIVHGDRIHLPRRIADFLKREAKKEIEKLVIKHTE ALGKRAKAIRYKDTSSRWGSCTSEGNLSFSWRIMMAPQPVINYLVAHEVAHLKEMNHGPKFWKLCEKLCPDTDRCKDWLK RNGGALQAIMFE
Sequences:
>Translated_252_residues MTIGFFRNLTKPKATPVVEREYCVAGRTLPLKIVESARARRLTLRIDSGGQGLRITVPPGLRRGEVDRFLDRHQDWLEQR LAKVPTRPQVRPGIKIPIRGVPHRIVHEPSKRGTVTVSRDERGPLLIVHGDRIHLPRRIADFLKREAKKEIEKLVIKHTE ALGKRAKAIRYKDTSSRWGSCTSEGNLSFSWRIMMAPQPVINYLVAHEVAHLKEMNHGPKFWKLCEKLCPDTDRCKDWLK RNGGALQAIMFE >Mature_251_residues TIGFFRNLTKPKATPVVEREYCVAGRTLPLKIVESARARRLTLRIDSGGQGLRITVPPGLRRGEVDRFLDRHQDWLEQRL AKVPTRPQVRPGIKIPIRGVPHRIVHEPSKRGTVTVSRDERGPLLIVHGDRIHLPRRIADFLKREAKKEIEKLVIKHTEA LGKRAKAIRYKDTSSRWGSCTSEGNLSFSWRIMMAPQPVINYLVAHEVAHLKEMNHGPKFWKLCEKLCPDTDRCKDWLKR NGGALQAIMFE
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28936; Mature: 28805
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGFFRNLTKPKATPVVEREYCVAGRTLPLKIVESARARRLTLRIDSGGQGLRITVPPG CCCCHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCEEEEECCCC LRRGEVDRFLDRHQDWLEQRLAKVPTRPQVRPGIKIPIRGVPHRIVHEPSKRGTVTVSRD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHCCCCCCCCEEEECC ERGPLLIVHGDRIHLPRRIADFLKREAKKEIEKLVIKHTEALGKRAKAIRYKDTSSRWGS CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC CTSEGNLSFSWRIMMAPQPVINYLVAHEVAHLKEMNHGPKFWKLCEKLCPDTDRCKDWLK CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH RNGGALQAIMFE CCCCEEEEEEEC >Mature Secondary Structure TIGFFRNLTKPKATPVVEREYCVAGRTLPLKIVESARARRLTLRIDSGGQGLRITVPPG CCCHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCEEEEECCCC LRRGEVDRFLDRHQDWLEQRLAKVPTRPQVRPGIKIPIRGVPHRIVHEPSKRGTVTVSRD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHCCCCCCCCEEEECC ERGPLLIVHGDRIHLPRRIADFLKREAKKEIEKLVIKHTEALGKRAKAIRYKDTSSRWGS CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC CTSEGNLSFSWRIMMAPQPVINYLVAHEVAHLKEMNHGPKFWKLCEKLCPDTDRCKDWLK CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH RNGGALQAIMFE CCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA