Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474215

Identifier: 13474215

GI number: 13474215

Start: 4003012

End: 4003689

Strand: Reverse

Name: 13474215

Synonym: mll5052

Alternate gene names: NA

Gene position: 4003689-4003012 (Counterclockwise)

Preceding gene: 13474216

Following gene: 13474213

Centisome position: 56.9

GC content: 61.95

Gene sequence:

>678_bases
ATGTCGGCAAACAGACGGGCGGCGTGCTGCGCGGCTAAACTTGCGGGCAGATGGCGAATCGTCCTCCAAAGGGCGATGGA
CCATCTGCGCTATTCCGGGCTGCCGTTCGAAGCACAGCGAGGGGCGTTTCTCGAGATCGTCTCGAGGGACTCGCTCGTCC
GTGAAGCGCTGGCGCGCGCCCGCACGCTTGGGCTGCCCGACTGGCTGGTGGTTTCAGGTGCGCTTTACAACAGCGTCTGG
AACCATCTGACCGGAAAGCCGTCAGGTTACGGCATCAAGGATGTCGACCTGTTTTATTTTGACGACAGCGACCTGTCCTA
TGAGGCCGAAGACGCTGTCATCCGCCGGGCAGCGCGGCATTTCGAGGGGCTGGCGCTGCCGGTCGAGGTGCGAAATCAGG
CGCGGGTGCATCTGTGGTATCCGCAGAAATTCGGCCAGCCCTGCCCGCGCTATACGAACGCGAGCGAATCCATCAGCTAT
TTTGCCTCGAAGACGCATGCGGTTGGAGTGCGCTACGATGCCGGCGGGCATTTGGAGCTGGTCGCTCCGTTCGGGCTTGA
TGACGTCTTTTCGTTCCGCATCACGCCGAATCGGGTGACGGACAATCAGCAGACGCATGAGGCGAAGGGCAAGCGGGCGC
TGGAGTGCTGGCCGGAGATTAGTGTGGTGCCGTGGTGA

Upstream 100 bases:

>100_bases
GCTGACAAGAAATCGATCGCGATCGAAGTGTCGATCCAGCCGGTCGAGAAGACGTTGACCGACGAGGATTTCGAGGCGTT
GGCCAAGCGCGTCGTCGAGA

Downstream 100 bases:

>100_bases
CCCCTTAGGGGCAGGGTCGATCCGCACAGCGGATCGGGGTGGGGGTACTCGTAGGCGCTCCCCCACCCCGTCTCGCTGCC
TCCGCTTCGCTGCGACAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSANRRAACCAAKLAGRWRIVLQRAMDHLRYSGLPFEAQRGAFLEIVSRDSLVREALARARTLGLPDWLVVSGALYNSVW
NHLTGKPSGYGIKDVDLFYFDDSDLSYEAEDAVIRRAARHFEGLALPVEVRNQARVHLWYPQKFGQPCPRYTNASESISY
FASKTHAVGVRYDAGGHLELVAPFGLDDVFSFRITPNRVTDNQQTHEAKGKRALECWPEISVVPW

Sequences:

>Translated_225_residues
MSANRRAACCAAKLAGRWRIVLQRAMDHLRYSGLPFEAQRGAFLEIVSRDSLVREALARARTLGLPDWLVVSGALYNSVW
NHLTGKPSGYGIKDVDLFYFDDSDLSYEAEDAVIRRAARHFEGLALPVEVRNQARVHLWYPQKFGQPCPRYTNASESISY
FASKTHAVGVRYDAGGHLELVAPFGLDDVFSFRITPNRVTDNQQTHEAKGKRALECWPEISVVPW
>Mature_224_residues
SANRRAACCAAKLAGRWRIVLQRAMDHLRYSGLPFEAQRGAFLEIVSRDSLVREALARARTLGLPDWLVVSGALYNSVWN
HLTGKPSGYGIKDVDLFYFDDSDLSYEAEDAVIRRAARHFEGLALPVEVRNQARVHLWYPQKFGQPCPRYTNASESISYF
ASKTHAVGVRYDAGGHLELVAPFGLDDVFSFRITPNRVTDNQQTHEAKGKRALECWPEISVVPW

Specific function: Unknown

COG id: COG3575

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25368; Mature: 25237

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANRRAACCAAKLAGRWRIVLQRAMDHLRYSGLPFEAQRGAFLEIVSRDSLVREALARA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
RTLGLPDWLVVSGALYNSVWNHLTGKPSGYGIKDVDLFYFDDSDLSYEAEDAVIRRAARH
HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
FEGLALPVEVRNQARVHLWYPQKFGQPCPRYTNASESISYFASKTHAVGVRYDAGGHLEL
HCCCCCEEEECCCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCEEE
VAPFGLDDVFSFRITPNRVTDNQQTHEAKGKRALECWPEISVVPW
EECCCCCCEEEEEECCCCCCCCCHHHHHHCCEEEECCCCEEECCC
>Mature Secondary Structure 
SANRRAACCAAKLAGRWRIVLQRAMDHLRYSGLPFEAQRGAFLEIVSRDSLVREALARA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
RTLGLPDWLVVSGALYNSVWNHLTGKPSGYGIKDVDLFYFDDSDLSYEAEDAVIRRAARH
HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
FEGLALPVEVRNQARVHLWYPQKFGQPCPRYTNASESISYFASKTHAVGVRYDAGGHLEL
HCCCCCEEEECCCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCEEE
VAPFGLDDVFSFRITPNRVTDNQQTHEAKGKRALECWPEISVVPW
EECCCCCCEEEEEECCCCCCCCCHHHHHHCCEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA