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The map label for this gene is ygjR [C]

Identifier: 13474210

GI number: 13474210

Start: 3998534

End: 3999523

Strand: Reverse

Name: ygjR [C]

Synonym: mll5047

Alternate gene names: 13474210

Gene position: 3999523-3998534 (Counterclockwise)

Preceding gene: 13474211

Following gene: 13474209

Centisome position: 56.84

GC content: 62.22

Gene sequence:

>990_bases
GTGATGTTCCGATGGGGTGTGTTGTCGACGGCCAAGATCGGTCGCGAGCAGTTGTTGCCGGCAATCGTCGAGGCGGAGAA
CGGCGTGCTGTCGGCGATCGCCAGCCGCGACCTGTCGAAAGCCAGGGCCCTGGCCGAGCGTTTCGGCGCCCGCTTTGCGT
TCGGATCGTACGAGGAACTGCTGGCCTCCAAGGACATTGACGGCGTCTATATCCCGCTGCCGACATCGCAGCATGTCGAA
TGGACGGCGAAGGCCATCGAGGCGGGAAAACATGTGCTGGTCGAGAAGCCCCTCGCGCTCGACGCCAAGGACATCCTCCC
CCTCATCAAGCTGCGCGATGCCAAGAAGGTGCTGGTTTGCGAAGCCTTCATGGTGATCTACCACCCGCAATGGATCAAGG
TGCGCGATCTCATCGCCAGCGGCGCCATCGGCCGGCTGCGCCATGTGCAGGGCGCGTTCTCCTACTACAATGTCGATCCC
AACAACATGCGCAACCAGCTCGATCTCGGCGGCGGTGCACTGCCCGACATCGGCGTTTACCCCACCGTTTCGACGCGGTT
TTCGACCGGCAAGGAGCCTAGCCGTGTGCAGGCGACGATCGAGCGCGACAAGAAATTCGGCACCGACATCTACTCCTCGA
TCCGCGCCGATTTCGGCGATTTCGAACTGTCCTTCTATTTGTCGACGCAGATGGCGGCGCGCCAGGTGATGGTGTTCCAC
GGCGAGAAGGGTTTCATCGAGGTCTTCTCGCCGTTCAATGCCGGGCTTTACGATCATCACCGCGTCGAACTGCACAACCA
GAACCACACCGAGGCGCAGGTGTTCCGCTTCCCCGGCACGCAGCAGTACCGGCTGGAGGTCGAGACTTTCGCGCGGGCGG
CACAGGGCGGCAAGGAGCGTGTCTTCACGCTGGAGGAATCCGTGCTCAACCAGAAGGTCATCGACGCCATCTTCCGCGCC
GGCGGCAAGGACGGTTGGGAGGCCGTTTAA

Upstream 100 bases:

>100_bases
ACGCTGACGGGGAAGCGGGGCTGAGCTGGGTCAGCCTCGGTCATTGGCTTTTCCGTCGATTTCGGGCAAACCTCGTCTGA
TACTACCGACATGGAGAAGC

Downstream 100 bases:

>100_bases
CTTTCTGCGATAAATAGCCGGCTAATTCTGGGAGGAAAAATGGCTGACGATGCGGACGTGATCATTGTCGGCGCGGGCCT
GGCCGGGTTGGTTGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MMFRWGVLSTAKIGREQLLPAIVEAENGVLSAIASRDLSKARALAERFGARFAFGSYEELLASKDIDGVYIPLPTSQHVE
WTAKAIEAGKHVLVEKPLALDAKDILPLIKLRDAKKVLVCEAFMVIYHPQWIKVRDLIASGAIGRLRHVQGAFSYYNVDP
NNMRNQLDLGGGALPDIGVYPTVSTRFSTGKEPSRVQATIERDKKFGTDIYSSIRADFGDFELSFYLSTQMAARQVMVFH
GEKGFIEVFSPFNAGLYDHHRVELHNQNHTEAQVFRFPGTQQYRLEVETFARAAQGGKERVFTLEESVLNQKVIDAIFRA
GGKDGWEAV

Sequences:

>Translated_329_residues
MMFRWGVLSTAKIGREQLLPAIVEAENGVLSAIASRDLSKARALAERFGARFAFGSYEELLASKDIDGVYIPLPTSQHVE
WTAKAIEAGKHVLVEKPLALDAKDILPLIKLRDAKKVLVCEAFMVIYHPQWIKVRDLIASGAIGRLRHVQGAFSYYNVDP
NNMRNQLDLGGGALPDIGVYPTVSTRFSTGKEPSRVQATIERDKKFGTDIYSSIRADFGDFELSFYLSTQMAARQVMVFH
GEKGFIEVFSPFNAGLYDHHRVELHNQNHTEAQVFRFPGTQQYRLEVETFARAAQGGKERVFTLEESVLNQKVIDAIFRA
GGKDGWEAV
>Mature_329_residues
MMFRWGVLSTAKIGREQLLPAIVEAENGVLSAIASRDLSKARALAERFGARFAFGSYEELLASKDIDGVYIPLPTSQHVE
WTAKAIEAGKHVLVEKPLALDAKDILPLIKLRDAKKVLVCEAFMVIYHPQWIKVRDLIASGAIGRLRHVQGAFSYYNVDP
NNMRNQLDLGGGALPDIGVYPTVSTRFSTGKEPSRVQATIERDKKFGTDIYSSIRADFGDFELSFYLSTQMAARQVMVFH
GEKGFIEVFSPFNAGLYDHHRVELHNQNHTEAQVFRFPGTQQYRLEVETFARAAQGGKERVFTLEESVLNQKVIDAIFRA
GGKDGWEAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=260, Percent_Identity=27.6923076923077, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI145693182, Length=233, Percent_Identity=30.0429184549356, Blast_Score=81, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24581117, Length=254, Percent_Identity=28.3464566929134, Blast_Score=113, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36796; Mature: 36796

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFRWGVLSTAKIGREQLLPAIVEAENGVLSAIASRDLSKARALAERFGARFAFGSYEEL
CEEECCCCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LASKDIDGVYIPLPTSQHVEWTAKAIEAGKHVLVEKPLALDAKDILPLIKLRDAKKVLVC
HHCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHH
EAFMVIYHPQWIKVRDLIASGAIGRLRHVQGAFSYYNVDPNNMRNQLDLGGGALPDIGVY
HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCCCCCC
PTVSTRFSTGKEPSRVQATIERDKKFGTDIYSSIRADFGDFELSFYLSTQMAARQVMVFH
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEHHHHHHEEEEEE
GEKGFIEVFSPFNAGLYDHHRVELHNQNHTEAQVFRFPGTQQYRLEVETFARAAQGGKER
CCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEHHHHHHHHCCCCCE
VFTLEESVLNQKVIDAIFRAGGKDGWEAV
EEEHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMFRWGVLSTAKIGREQLLPAIVEAENGVLSAIASRDLSKARALAERFGARFAFGSYEEL
CEEECCCCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LASKDIDGVYIPLPTSQHVEWTAKAIEAGKHVLVEKPLALDAKDILPLIKLRDAKKVLVC
HHCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHH
EAFMVIYHPQWIKVRDLIASGAIGRLRHVQGAFSYYNVDPNNMRNQLDLGGGALPDIGVY
HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCCCCCC
PTVSTRFSTGKEPSRVQATIERDKKFGTDIYSSIRADFGDFELSFYLSTQMAARQVMVFH
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEHHHHHHEEEEEE
GEKGFIEVFSPFNAGLYDHHRVELHNQNHTEAQVFRFPGTQQYRLEVETFARAAQGGKER
CCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEHHHHHHHHCCCCCE
VFTLEESVLNQKVIDAIFRAGGKDGWEAV
EEEHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]