Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is yfiQ [H]

Identifier: 13474206

GI number: 13474206

Start: 3992874

End: 3994958

Strand: Direct

Name: yfiQ [H]

Synonym: mlr5043

Alternate gene names: 13474206

Gene position: 3992874-3994958 (Clockwise)

Preceding gene: 13474205

Following gene: 13474207

Centisome position: 56.75

GC content: 66.28

Gene sequence:

>2085_bases
ATGACCATGCATAAACTTGAACGCCTCCTGCGCCCGAAATCGATCGCCGTCTTCGGTGGCGTGCAGGCCGCCGCCGTCGT
CGCGCAATCGATCAAGATGGGTTTTGCTGGCGAGATCTGGCCGGTGCACCCGACCAAGGACGAGGTTGCCGGACGCAAGG
CCTACCGGTCCGTCGCCGATCTGCCCGGCGCGCCGGATGCCGCCTTTGTCGGCGTCAACCGGCATCTGACCATCGAGGTC
GTCAAGGCGCTGGCCGAACGCGGCGCCGGCGGCGCCGTCTGCTTTGCCGCCGGCTTCCTCGAGACCGAGGCCTATGACGA
TGACGGCGAGCGGCTGCAGGCCGAACTGGTTGCCGCGGCTGGCGAGATGCCGATCATCGGGCCGAACTGCTATGGTCTGA
TCAACTATGCCGACGGCGCGCTTTTGTGGCCCGACCAGCATGGCGGCATCCGGCTGGAAGAGGGCGGCAAGGGCGCCGCC
ATCATCACGCAGTCGTCCAACATCGCCATCAACATGACGATGCAGAAGCGCGGCCTGCCGATCGCCTTCCTGATGACCGC
CGGCAACCAGGCGCAGACCGGCCTCTCCGAAATGGCGCTCGGCCTGATCGAGGATGATCGCGTCACCTCACTCGGCTTGC
ACATCGAGGCTTTCGATTCGGTAGCCGGCTTCGAGCGACTGGCGGCACGGGCGCGAGAGCTAAGAAAACCGATCATCGCC
ATGAAGGTCGGCCGCTCCGAACAGGCACGGCAGGCCACCGTGTCGCACACCGCCTCGCTGGCCGGCTCGGACGCGGCCTC
GGGCGCTTTCCTGAGGCGACTCGGCATTGCGCGCGTCGATTCCATCCCCGCCTTCATCGAGGCGCTGAAGCTGCTGCACA
TCACCGGGCCGCTGCCCGGCTATCGCCTGTCGTCGATGAGCTGTTCGGGCGGCGAAGCTTCCGTCATGGCCGACAGCGCC
GAAGGGCGCTGGGTGAACTTCCCGGTTCTGACGGAAAAACATCGCGCCCATGTCAAGTCGACGCTCGGGCCGCTGGTCGC
GGTGGCCAACCCGTTGGACTACCACACCTTCATCTGGAACAACGAGCCGGCGATGACCGCCACCTTCACCGCCATGGTGT
CGGGCGGCTTCGACCTGAACATGCTGGTGCTCGACTTTCCGCGCCCCGACCGCTGCTCGGTCACCGACTGGTGGGCGACG
CTGCGCGCCTTCGAATCGGCGCTGAAGACCAACGAGGCACATGGCGCGATCGTCTCCTCGCTGCCGGAGAACCTGCCCGA
GGAATACACCGCAGAGCTGATGGCGCGCGGCATGGTGCCGTTGTTCGGCATTTCCGAGGCCATGGATGCCGCAGGCGCGG
CAGCCTTCATCGGCTGGGCATGGGCTGAACCGCAGGCGCAGCCGGTCGACACATCCGCTGCCGGCGCCGCCGGCGGCGGG
CATGTCACGCCCGACGAGGCCGAAGCCAAGGCGCGGCTGATCAAGGCCGGGCTTCCCGTGCCCAAGGGCGAGCGCGCCGG
CAATGCGGTCGAGGCGGTGATTTCCTCGATGGCGCTCGGCTTTCCCGTTGCCCTGAAGGCGCTGGGCGTCACCCATAAAT
CCGAGGTCGGCGCTGTCCGGCTCAACCTCAAGGACGCCGAATCCGTCAGCACGGCGGCGCATGATCTGCTGCCGCTCGGC
ACTGGCCTCTATGTCGAGCGCATGGTGCGCGACGGCGTCGCTGAACTGATCGTCGGCTTCACCAGGGATCCGATGTTCGG
TGCAGTCATGACGCTGGGCACTGGCGGCGTACTGGTCGAATTGCTGCGCGACAGCGTCACCTTGATGCTGCCGGCGACCC
GCGACGACATCGAGGCGGCTTTGCGCGGCCTGAAGCTGTTCCCGCTGCTCGAAGGCTATCGCGGCCGGCCGAAGGCCGAT
GTCGCGGCCGCCATCGATGCTATCGCGGGCATTGCCGACTTCGTGCAGAAGAATGCCGGCGAGATCGAGGAACTCGACAT
CAATCCGCTGATCGTCTGCGTCGAAGGCAAGGGTGCCTGGATCGCCGACGCGCTGCTGGTGCTCGGAGAAAACAAGAATG
TCTGA

Upstream 100 bases:

>100_bases
TGCTGCGTCCGTTCGGTGCTTAGAGCATGATCGCCCAAAGCCGAGATTCGGTTTTGTCGGGCAAACGAGATCGTTTGTCC
TGAGATGCTCAAACGAAAAG

Downstream 100 bases:

>100_bases
CGTCATTTCGACCCGCCGCGAAGGCTCGATTCTCGAGGTCACGCTCGACCGGCCCAAGGCCAACGCCATCGACCTGAAGA
CCTCGCGGCTGATGGGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MTMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVADLPGAPDAAFVGVNRHLTIEV
VKALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAAGEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAA
IITQSSNIAINMTMQKRGLPIAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIA
MKVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPGYRLSSMSCSGGEASVMADSA
EGRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWNNEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWAT
LRAFESALKTNEAHGAIVSSLPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGG
HVTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVRLNLKDAESVSTAAHDLLPLG
TGLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKAD
VAAAIDAIAGIADFVQKNAGEIEELDINPLIVCVEGKGAWIADALLVLGENKNV

Sequences:

>Translated_694_residues
MTMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVADLPGAPDAAFVGVNRHLTIEV
VKALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAAGEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAA
IITQSSNIAINMTMQKRGLPIAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIA
MKVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPGYRLSSMSCSGGEASVMADSA
EGRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWNNEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWAT
LRAFESALKTNEAHGAIVSSLPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGG
HVTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVRLNLKDAESVSTAAHDLLPLG
TGLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKAD
VAAAIDAIAGIADFVQKNAGEIEELDINPLIVCVEGKGAWIADALLVLGENKNV
>Mature_693_residues
TMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVADLPGAPDAAFVGVNRHLTIEVV
KALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAAGEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAAI
ITQSSNIAINMTMQKRGLPIAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIAM
KVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPGYRLSSMSCSGGEASVMADSAE
GRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWNNEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWATL
RAFESALKTNEAHGAIVSSLPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGGH
VTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVRLNLKDAESVSTAAHDLLPLGT
GLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKADV
AAAIDAIAGIADFVQKNAGEIEELDINPLIVCVEGKGAWIADALLVLGENKNV

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=720, Percent_Identity=25.9722222222222, Blast_Score=132, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR011761
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR016102 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 73128; Mature: 72997

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVAD
CCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHC
LPGAPDAAFVGVNRHLTIEVVKALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAA
CCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHC
GEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAAIITQSSNIAINMTMQKRGLP
CCCCEECCCCEEEEEECCCEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCCC
IAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIA
EEEEEECCCHHHCCHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCEEE
MKVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPG
EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YRLSSMSCSGGEASVMADSAEGRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWN
CEECCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC
NEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWATLRAFESALKTNEAHGAIVSS
CCCCCEEEEEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGG
HHHCCCHHHHHHHHHCCCCCHHCHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCCCCC
HVTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVR
CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEE
LNLKDAESVSTAAHDLLPLGTGLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVE
EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
LLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKADVAAAIDAIAGIADFVQKNAG
HHHCCEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
EIEELDINPLIVCVEGKGAWIADALLVLGENKNV
CCEEECCCEEEEEECCCCCHHHHHHHEECCCCCC
>Mature Secondary Structure 
TMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVAD
CHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHC
LPGAPDAAFVGVNRHLTIEVVKALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAA
CCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHC
GEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAAIITQSSNIAINMTMQKRGLP
CCCCEECCCCEEEEEECCCEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCCC
IAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIA
EEEEEECCCHHHCCHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCEEE
MKVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPG
EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YRLSSMSCSGGEASVMADSAEGRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWN
CEECCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC
NEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWATLRAFESALKTNEAHGAIVSS
CCCCCEEEEEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGG
HHHCCCHHHHHHHHHCCCCCHHCHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCCCCC
HVTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVR
CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEE
LNLKDAESVSTAAHDLLPLGTGLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVE
EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
LLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKADVAAAIDAIAGIADFVQKNAG
HHHCCEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
EIEELDINPLIVCVEGKGAWIADALLVLGENKNV
CCEEECCCEEEEEECCCCCHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]