Click here to switch to the map view.

The map label for this gene is 13474195

Identifier: 13474195

GI number: 13474195

Start: 3982029

End: 3982568

Strand: Reverse

Name: 13474195

Synonym: mll5031

Alternate gene names: NA

Gene position: 3982568-3982029 (Counterclockwise)

Preceding gene: 13474198

Following gene: 13474192

Centisome position: 56.6

GC content: 60.93

Gene sequence:

>540_bases
GTGGCGCCCGAAAATGTCAGGCCGAATGCGTCCCTGATTGCCATGCAACATCCTCTGATCGACCTTGGACAAGCTCGCGG
CCCTTCAGGCCAAGGCGATCTTAAATCATGGGCCACGGACGTGCCAATCACGCACTGCATAAGGTCTATCCCAGCAGCCT
TTGCAGTTCATCAACCATGGAGCCTGTCGCTCGACGACACCAACGACCGTTTCTCGTCGGTTTCCTTCGTCACCGATGAG
AGCGTCAGCGGCCGGCGGGGTGCGCGGCTGCAGGGCGAGACCACGATCAACGGTATCGCGCTGCAGCCCTACCTCAAAGC
CAACATCTGGCACGATTTCGGCGGCACCGACCGTGTCAGCTTCGATACCACCGACATCACCACCGAGGGCCGGTCGACCT
CCTTCGAGTTCGGCGGCGGCGTGGTCGCCAAAGTGACCGACAAGGTCAGCCTCTTTGCCACCGGCGACTACACCACCAAT
CTCGGCGGCGACAAGCGCCGCATCCTCGAGGGCAATGTCGGTATCAGCATGAAGTGGTGA

Upstream 100 bases:

>100_bases
GGGATCCGCCAATATGGCACGGTCGACGGAGGCGACGGGATCGCCGATGAAGCACAACAGTTCACGCACGGCCTGGCTGT
AGGGCGTGAACCCGGTTTCG

Downstream 100 bases:

>100_bases
ACCAGACCATTCGAAACCGGAACCGGTTTCGAATGGTCGAATAAAAGGCCTAATTCCCCGAACGCATCGCCACGGTGGCG
ATGCCGGCGCCGACCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Autotransporter Barrel; Autotransporter; Autotransporter Protein; Outer Membrane Autotransporter Barrel Domain Protein; Autotransporter Beta-Domain-Containing Protein; Autotransporting Virulence Factor Family Member; Outer Membrane Autotransporter Barrel Protein; Autoporter Protein Type V Secretion System

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAPENVRPNASLIAMQHPLIDLGQARGPSGQGDLKSWATDVPITHCIRSIPAAFAVHQPWSLSLDDTNDRFSSVSFVTDE
SVSGRRGARLQGETTINGIALQPYLKANIWHDFGGTDRVSFDTTDITTEGRSTSFEFGGGVVAKVTDKVSLFATGDYTTN
LGGDKRRILEGNVGISMKW

Sequences:

>Translated_179_residues
MAPENVRPNASLIAMQHPLIDLGQARGPSGQGDLKSWATDVPITHCIRSIPAAFAVHQPWSLSLDDTNDRFSSVSFVTDE
SVSGRRGARLQGETTINGIALQPYLKANIWHDFGGTDRVSFDTTDITTEGRSTSFEFGGGVVAKVTDKVSLFATGDYTTN
LGGDKRRILEGNVGISMKW
>Mature_178_residues
APENVRPNASLIAMQHPLIDLGQARGPSGQGDLKSWATDVPITHCIRSIPAAFAVHQPWSLSLDDTNDRFSSVSFVTDES
VSGRRGARLQGETTINGIALQPYLKANIWHDFGGTDRVSFDTTDITTEGRSTSFEFGGGVVAKVTDKVSLFATGDYTTNL
GGDKRRILEGNVGISMKW

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19341; Mature: 19210

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPENVRPNASLIAMQHPLIDLGQARGPSGQGDLKSWATDVPITHCIRSIPAAFAVHQPW
CCCCCCCCCCEEEEEECCCEECCCCCCCCCCCCHHHHCCCCCHHHHHHHCCHHEEECCCC
SLSLDDTNDRFSSVSFVTDESVSGRRGARLQGETTINGIALQPYLKANIWHDFGGTDRVS
EEEECCCCCCCEEEEEEECCCCCCCCCCEEECCCEECEEEECCEEEEEEEECCCCCCEEE
FDTTDITTEGRSTSFEFGGGVVAKVTDKVSLFATGDYTTNLGGDKRRILEGNVGISMKW
ECCCEEEECCCCCEEECCCEEEEEEECEEEEEECCCEEECCCCCCEEEEECCCCEEEEC
>Mature Secondary Structure 
APENVRPNASLIAMQHPLIDLGQARGPSGQGDLKSWATDVPITHCIRSIPAAFAVHQPW
CCCCCCCCCEEEEEECCCEECCCCCCCCCCCCHHHHCCCCCHHHHHHHCCHHEEECCCC
SLSLDDTNDRFSSVSFVTDESVSGRRGARLQGETTINGIALQPYLKANIWHDFGGTDRVS
EEEECCCCCCCEEEEEEECCCCCCCCCCEEECCCEECEEEECCEEEEEEEECCCCCCEEE
FDTTDITTEGRSTSFEFGGGVVAKVTDKVSLFATGDYTTNLGGDKRRILEGNVGISMKW
ECCCEEEECCCCCEEECCCEEEEEEECEEEEEECCCEEECCCCCCEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA