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The map label for this gene is ycfS [C]

Identifier: 13474192

GI number: 13474192

Start: 3980079

End: 3980846

Strand: Reverse

Name: ycfS [C]

Synonym: mll5027

Alternate gene names: 13474192

Gene position: 3980846-3980079 (Counterclockwise)

Preceding gene: 13474195

Following gene: 13474191

Centisome position: 56.58

GC content: 65.36

Gene sequence:

>768_bases
ATGCGTGAGTTGCCGCAAGGTCTGACGCCGCCACGAAACGGCGACGCAATCGAAACCGATCATCCTCTTTCCCGCCGCGC
CGTCCTCTCAGGGGCAGGCGCGCTGGCGCTGCTCAGCGCCGCCGGCTGCTCGACGTCCGGCGGTGGAATGCCGGTGCTGG
AACTCGACAATACTGTCACCGGTTCCGTGCCGCCGATGCGGCCGGCGATCAGCGTCGACAAGAACATCACCAGCCCCGAC
CTGATGTACGCCGCTTTGACGGACAACGGTTTCAACGTGCCTGAAGTGCCGTATCTCAAGGTCAAGCCGGAATTCCGCCG
CCAGATCGTCGTCGACACGACCGGCGAAGCGCCCGGCACCATCGTCGTCCATCTCAAGGAGCGCATGCTCTATCTCGTCC
AGCCGGGCGGCGACGCCATCCGCTACGGCGTCGGCATCGGCAAGGACGGCTTCCGCTGGTCCGGCCGCGCCAACATCCAG
TACGGCAGGGAATGGCCGACCTGGACGCCGCCACCGGAGATGATCCAGCGCAAGCCCGAACTGGTGAAGTGGCAGGGCGG
CCAGCCCGGCGGCCTCACCAATCCGCTCGGCGCGCGCGCGCTCTACATCTATCAGGACGGCAAGGACACCGGCTATCGCA
TCCACGGCTCGCCCGAATGGTGGAGCATCGGCCAGGCGATGTCGTCGGGCTGCGTGCGGCTGATCAACCAGGACATTATC
GACCTCTACAGCCGCGTTTCGAAGAAAAACCCGGTCGTCGTCATGTGA

Upstream 100 bases:

>100_bases
AGGCAGCGCAAGGCATTCACGCTTTATCAACCATGAATGATGAAAATGCCCGCTATCCGGCCGGACCGTGCTTCCCGCCG
ACAGCGTAGGGTTTGGGTAT

Downstream 100 bases:

>100_bases
TCCTTTATCCCTCTGTTTCTCCCGTTGCGTGATGCGGCAAGACAGGCCAAGGTGCCTTGAAAACCATCGCTCGGGAGACG
TCAGGAATGGCCGGAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; ErfK/YbiS/YcfS/YnhG Family Protein/Tat Domain Protein; ErfK/YbiS/YhnG Oxidoreductase; Twin-Arginine Translocation Pathway Signal; Protein Ybis; ErfK/YbiS/YcfS/YnhG Superfamily; Carnitine Operon Oxidoreductase; Carnitine Operon Oxidoreductase CaiA; ATP Synthase Subunit; Protein ErfK/SrfK; ErfK/YbiS/YhnG Protein; Exported ErfK/YbiS/YhnG Family Protein; Signal Peptide Protein; Exported ErfK/YbiS/YhnG Protein; ErfK/YbiS/YhnG Family Protein

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRELPQGLTPPRNGDAIETDHPLSRRAVLSGAGALALLSAAGCSTSGGGMPVLELDNTVTGSVPPMRPAISVDKNITSPD
LMYAALTDNGFNVPEVPYLKVKPEFRRQIVVDTTGEAPGTIVVHLKERMLYLVQPGGDAIRYGVGIGKDGFRWSGRANIQ
YGREWPTWTPPPEMIQRKPELVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSPEWWSIGQAMSSGCVRLINQDII
DLYSRVSKKNPVVVM

Sequences:

>Translated_255_residues
MRELPQGLTPPRNGDAIETDHPLSRRAVLSGAGALALLSAAGCSTSGGGMPVLELDNTVTGSVPPMRPAISVDKNITSPD
LMYAALTDNGFNVPEVPYLKVKPEFRRQIVVDTTGEAPGTIVVHLKERMLYLVQPGGDAIRYGVGIGKDGFRWSGRANIQ
YGREWPTWTPPPEMIQRKPELVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSPEWWSIGQAMSSGCVRLINQDII
DLYSRVSKKNPVVVM
>Mature_255_residues
MRELPQGLTPPRNGDAIETDHPLSRRAVLSGAGALALLSAAGCSTSGGGMPVLELDNTVTGSVPPMRPAISVDKNITSPD
LMYAALTDNGFNVPEVPYLKVKPEFRRQIVVDTTGEAPGTIVVHLKERMLYLVQPGGDAIRYGVGIGKDGFRWSGRANIQ
YGREWPTWTPPPEMIQRKPELVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSPEWWSIGQAMSSGCVRLINQDII
DLYSRVSKKNPVVVM

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787356, Length=132, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787968, Length=139, Percent_Identity=35.9712230215827, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788299, Length=134, Percent_Identity=35.8208955223881, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27735; Mature: 27735

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELPQGLTPPRNGDAIETDHPLSRRAVLSGAGALALLSAAGCSTSGGGMPVLELDNTVT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCC
GSVPPMRPAISVDKNITSPDLMYAALTDNGFNVPEVPYLKVKPEFRRQIVVDTTGEAPGT
CCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECHHHCCEEEEECCCCCCCE
IVVHLKERMLYLVQPGGDAIRYGVGIGKDGFRWSGRANIQYGREWPTWTPPPEMIQRKPE
EEEEEECCEEEEECCCCCEEEECCCCCCCCCEECCCCCEEECCCCCCCCCCHHHHHCCCC
LVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSPEWWSIGQAMSSGCVRLINQDII
EEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DLYSRVSKKNPVVVM
HHHHHHCCCCCEEEC
>Mature Secondary Structure
MRELPQGLTPPRNGDAIETDHPLSRRAVLSGAGALALLSAAGCSTSGGGMPVLELDNTVT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCC
GSVPPMRPAISVDKNITSPDLMYAALTDNGFNVPEVPYLKVKPEFRRQIVVDTTGEAPGT
CCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECHHHCCEEEEECCCCCCCE
IVVHLKERMLYLVQPGGDAIRYGVGIGKDGFRWSGRANIQYGREWPTWTPPPEMIQRKPE
EEEEEECCEEEEECCCCCEEEECCCCCCCCCEECCCCCEEECCCCCCCCCCHHHHHCCCC
LVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSPEWWSIGQAMSSGCVRLINQDII
EEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DLYSRVSKKNPVVVM
HHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA