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The map label for this gene is ndoA [H]

Identifier: 13474173

GI number: 13474173

Start: 3964644

End: 3964958

Strand: Direct

Name: ndoA [H]

Synonym: mlr4999

Alternate gene names: 13474173

Gene position: 3964644-3964958 (Clockwise)

Preceding gene: 13474172

Following gene: 13474174

Centisome position: 56.35

GC content: 60.32

Gene sequence:

>315_bases
ATGAGCGACTGGGTCGAGGCCTGTGCTACCGACGACATCGATGAAGAGGATGTGATGCGCTTCGATCATGGCGGGCGCAC
CTTCGCCATCTATCGCAGCCCCGACGACGAATATTTCGCCACGGACGGGCTCTGCACGCATGAGAAGGTGCATCTCGCCG
ACGGTCTGGTGATGGACGACATCATCGAATGCCCCAAGCACAATGGCCGCTTCAACTACAAGACCGGCGCGGCCAGGGGC
GCCCCGGTCTGCGTCAACCTGAAAACCTATCCGGTCAAGGTCGACGCCGGCAAAGTTCTCGTTCAGGTCGGATGA

Upstream 100 bases:

>100_bases
CCGCCGACCGCCAGGCCGTATCGCGAGGAATTCCACAGCGATGCCATCGCCGCCGCGGCGGAATGATCGCGGCGAATCCA
TTTTTCCAGGGAGTGCTGAA

Downstream 100 bases:

>100_bases
CGGAGATGGCGCGAGGAATGGTCATCATCGGCGCCGGCGAATGCGGCGGGCGGGCAGCTCTCACGCTGCGCGATCTCGGC
TATGATGGGCCGGTGACGCT

Product: putative Rieske-like ferredoxin MocE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSDWVEACATDDIDEEDVMRFDHGGRTFAIYRSPDDEYFATDGLCTHEKVHLADGLVMDDIIECPKHNGRFNYKTGAARG
APVCVNLKTYPVKVDAGKVLVQVG

Sequences:

>Translated_104_residues
MSDWVEACATDDIDEEDVMRFDHGGRTFAIYRSPDDEYFATDGLCTHEKVHLADGLVMDDIIECPKHNGRFNYKTGAARG
APVCVNLKTYPVKVDAGKVLVQVG
>Mature_103_residues
SDWVEACATDDIDEEDVMRFDHGGRTFAIYRSPDDEYFATDGLCTHEKVHLADGLVMDDIIECPKHNGRFNYKTGAARGA
PVCVNLKTYPVKVDAGKVLVQVG

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11523; Mature: 11392

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDWVEACATDDIDEEDVMRFDHGGRTFAIYRSPDDEYFATDGLCTHEKVHLADGLVMDD
CCCHHHHHCCCCCCHHHHEEECCCCCEEEEEECCCCCEEECCCCCCCCEEECCCCCCHHH
IIECPKHNGRFNYKTGAARGAPVCVNLKTYPVKVDAGKVLVQVG
HHHCCCCCCEEEEECCCCCCCCEEEECEEEEEEECCCEEEEEEC
>Mature Secondary Structure 
SDWVEACATDDIDEEDVMRFDHGGRTFAIYRSPDDEYFATDGLCTHEKVHLADGLVMDD
CCHHHHHCCCCCCHHHHEEECCCCCEEEEEECCCCCEEECCCCCCCCEEECCCCCCHHH
IIECPKHNGRFNYKTGAARGAPVCVNLKTYPVKVDAGKVLVQVG
HHHCCCCCCEEEEECCCCCCCCEEEECEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA