| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is phnM [H]
Identifier: 13474154
GI number: 13474154
Start: 3943580
End: 3944719
Strand: Reverse
Name: phnM [H]
Synonym: mll4974
Alternate gene names: 13474154
Gene position: 3944719-3943580 (Counterclockwise)
Preceding gene: 13474155
Following gene: 13474153
Centisome position: 56.06
GC content: 66.23
Gene sequence:
>1140_bases ATGACCGCCGAGACCGTTCTTTCCAACGCCCGCATCGTGCTAGCCGACGAAATCGTCGAGGGGTCGCTGGTGCTGCGTGA CGGCTTTATCGCCGGCATCGACGCGGGCAGCAGCCGGATCGGCGAGGACATGGGCGGTGACTATGTCACTCCCGGGCTGG TCGAGTTGCACACCGACCACCTCGAAGGCCATTACGCACCCCGGCCGAAGGTGCGCTGGAACCCGATCGCAGCCGTGCTT GCCCATGACGCGCAGGTGGCGACGGCCGGCATCACCACCGTGCTCGACGCCTTGCGTGTCGGCATGGACGAGGACGCCGA TCTCACCTTGGCCGATATCCGCAAGCTGGCCGATGCGATCGAGGACAGCGTCGCGCAGGATCGTTTGCGCGCCGATCACT TCCTGCATCTGCGCTGCGAGGTCTCGGCGCCGGATTGCCTGCAAGCCTTCGCCAGTTTCGACCAGGACGACCGGGTCAAG CTGGCCTCGCTGATGGATCATGCGCCCGGCCAGCGCCAGTTCGTCAATCTCGAAACCTATGCCTACTACTACCAGCGCAA GCTGAAGCTGAGCGACCGCGACTTCAAATTGTTCTGCGAGAAGCGGATGGCGGAATCGGCGCGCAATTCGGCGCCGAACC GGGCGGTGATCGCGGCTGCCTGCCATGAGCGCGGCATCGTGCTCGCCAGCCATGACGATGCCACTTCAGGCCATGTCGAC GAGGCGATCGAGCAAGGCGTGCGCGTTGCCGAGTTCCCGACGACCGAGGAAGCGGCGCGTGCTTCGAAGGCCGCGGGCCT GGGCGTGCTGATGGGCGCGCCCAACGTCATGCGCGGCGCCTCGCATTCGGGCAATGTCTCGGCGCGCACGCTGGCCGGCG ACGGCCTGCTCGATATCCTGTCTTCGGACTATATCCCCTTCAGCCTGATCCAGTCGGCCTTCTTCCTCGGCGACATGGTC GAAGGCATTTCGCTGCCGCATGCGGTCGCCATGGTGTCGAAGAACCCGGCCGAGGCCGTTGGCCTGACCGACCGCGGCAC CATCGAACAGGGCCGCCGCGCCGACCTGGTACGTGTGCGCGTCGACGACCATGTTCCGGTGGTGCGCACCGTCTGGCGGC AGGGACGCCGGGTCGCATGA
Upstream 100 bases:
>100_bases GTGCGCCGTTCATGGTGCTTTCGCAGCACGCGCTGGGACGCCGCCCGGCGAGAAAAACCGCCTGAACACCCTTGCTCGAA GAATCAAAGGACTGCCCGAA
Downstream 100 bases:
>100_bases TGGTGTCGGCCTTGATCGAGCGCGAGTTATCCGCTGAAACGTTCCCTGTCCGTCATGGCGTTTTTGTCGCCGTCGTGGGG CCTAGCGGCGCCGGCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTAETVLSNARIVLADEIVEGSLVLRDGFIAGIDAGSSRIGEDMGGDYVTPGLVELHTDHLEGHYAPRPKVRWNPIAAVL AHDAQVATAGITTVLDALRVGMDEDADLTLADIRKLADAIEDSVAQDRLRADHFLHLRCEVSAPDCLQAFASFDQDDRVK LASLMDHAPGQRQFVNLETYAYYYQRKLKLSDRDFKLFCEKRMAESARNSAPNRAVIAAACHERGIVLASHDDATSGHVD EAIEQGVRVAEFPTTEEAARASKAAGLGVLMGAPNVMRGASHSGNVSARTLAGDGLLDILSSDYIPFSLIQSAFFLGDMV EGISLPHAVAMVSKNPAEAVGLTDRGTIEQGRRADLVRVRVDDHVPVVRTVWRQGRRVA
Sequences:
>Translated_379_residues MTAETVLSNARIVLADEIVEGSLVLRDGFIAGIDAGSSRIGEDMGGDYVTPGLVELHTDHLEGHYAPRPKVRWNPIAAVL AHDAQVATAGITTVLDALRVGMDEDADLTLADIRKLADAIEDSVAQDRLRADHFLHLRCEVSAPDCLQAFASFDQDDRVK LASLMDHAPGQRQFVNLETYAYYYQRKLKLSDRDFKLFCEKRMAESARNSAPNRAVIAAACHERGIVLASHDDATSGHVD EAIEQGVRVAEFPTTEEAARASKAAGLGVLMGAPNVMRGASHSGNVSARTLAGDGLLDILSSDYIPFSLIQSAFFLGDMV EGISLPHAVAMVSKNPAEAVGLTDRGTIEQGRRADLVRVRVDDHVPVVRTVWRQGRRVA >Mature_378_residues TAETVLSNARIVLADEIVEGSLVLRDGFIAGIDAGSSRIGEDMGGDYVTPGLVELHTDHLEGHYAPRPKVRWNPIAAVLA HDAQVATAGITTVLDALRVGMDEDADLTLADIRKLADAIEDSVAQDRLRADHFLHLRCEVSAPDCLQAFASFDQDDRVKL ASLMDHAPGQRQFVNLETYAYYYQRKLKLSDRDFKLFCEKRMAESARNSAPNRAVIAAACHERGIVLASHDDATSGHVDE AIEQGVRVAEFPTTEEAARASKAAGLGVLMGAPNVMRGASHSGNVSARTLAGDGLLDILSSDYIPFSLIQSAFFLGDMVE GISLPHAVAMVSKNPAEAVGLTDRGTIEQGRRADLVRVRVDDHVPVVRTVWRQGRRVA
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3454
COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790533, Length=377, Percent_Identity=49.3368700265252, Blast_Score=348, Evalue=2e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 - InterPro: IPR012696 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 41001; Mature: 40870
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAETVLSNARIVLADEIVEGSLVLRDGFIAGIDAGSSRIGEDMGGDYVTPGLVELHTDH CCHHHHHCCCEEEEEECCCCCEEEEECCEEEEECCCCHHHHHHCCCCCCCCCCEEEEHHH LEGHYAPRPKVRWNPIAAVLAHDAQVATAGITTVLDALRVGMDEDADLTLADIRKLADAI CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHH EDSVAQDRLRADHFLHLRCEVSAPDCLQAFASFDQDDRVKLASLMDHAPGQRQFVNLETY HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEHHHH AYYYQRKLKLSDRDFKLFCEKRMAESARNSAPNRAVIAAACHERGIVLASHDDATSGHVD HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCEEEEECCCCCCCHHH EAIEQGVRVAEFPTTEEAARASKAAGLGVLMGAPNVMRGASHSGNVSARTLAGDGLLDIL HHHHCCCEEEECCCHHHHHHHHHHCCCEEEECCCHHHCCCCCCCCCEEEEECCCCHHHHH SSDYIPFSLIQSAFFLGDMVEGISLPHAVAMVSKNPAEAVGLTDRGTIEQGRRADLVRVR HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEE VDDHVPVVRTVWRQGRRVA ECCCCHHHHHHHHCCCCCC >Mature Secondary Structure TAETVLSNARIVLADEIVEGSLVLRDGFIAGIDAGSSRIGEDMGGDYVTPGLVELHTDH CHHHHHCCCEEEEEECCCCCEEEEECCEEEEECCCCHHHHHHCCCCCCCCCCEEEEHHH LEGHYAPRPKVRWNPIAAVLAHDAQVATAGITTVLDALRVGMDEDADLTLADIRKLADAI CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHH EDSVAQDRLRADHFLHLRCEVSAPDCLQAFASFDQDDRVKLASLMDHAPGQRQFVNLETY HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEHHHH AYYYQRKLKLSDRDFKLFCEKRMAESARNSAPNRAVIAAACHERGIVLASHDDATSGHVD HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCEEEEECCCCCCCHHH EAIEQGVRVAEFPTTEEAARASKAAGLGVLMGAPNVMRGASHSGNVSARTLAGDGLLDIL HHHHCCCEEEECCCHHHHHHHHHHCCCEEEECCCHHHCCCCCCCCCEEEEECCCCHHHHH SSDYIPFSLIQSAFFLGDMVEGISLPHAVAMVSKNPAEAVGLTDRGTIEQGRRADLVRVR HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEE VDDHVPVVRTVWRQGRRVA ECCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]