| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474104
Identifier: 13474104
GI number: 13474104
Start: 3898379
End: 3899194
Strand: Direct
Name: 13474104
Synonym: mlr4910
Alternate gene names: NA
Gene position: 3898379-3899194 (Clockwise)
Preceding gene: 13474103
Following gene: 13474105
Centisome position: 55.41
GC content: 66.3
Gene sequence:
>816_bases GTGCTCGAGGCCGCCGGCATCCAGCCGCCTAAGACGCTGGACGAACTGATCGCCGACGTGCCGAAGCTCACCAACCCGGA CAAGGGCATGTATGGCATCGCGCTACGCGGCGCGCGCGGTTCGGGCGCCAATGTCTGGCGCTGGATGCCCTTCTTCAAGG CCTATGGCGGCCAGTGGTTCGATGGCGACAAGCCGGTCTTCAATTCGGACGCCGCCGTCAAGGCGACCGAGACCTATCTG AAGCTGTTCAAGGATTCGGCACCGGGCACGCAGACCGGCAGCTGGGATGAATCGACCGGCGCCTTCCTGTCGGGCCAGGT CGCCATCCTCGTCGAATCGACGCCGCTGTCGGGCATGGCGGTCGATCCGAAGACCTCGCAGGTGGTCGGCAAGATCGGCT TCCTGCCGCCGCCCTCGCCGCTGCCCGGCGGCGGTTACGGCCATGGCCTTGCCATCGCGGCGAAGGCCAATGCCGACGAT GCCTCGAAGAAATGCGCCGGCCTGTTCATCGCCTGGGCGACGTCGAAGGAAAACGAGAAGCGCCGGCTCGACGCCCACCA GTTCGGCGAGCTGAACCGCACCAGCATCCTGTCCAGCAAGGAGTTCGCCGGCATCTACGGCGCCGATCTCGGCCAGGCGC TGGCCGAAACCGGCAAGGTCACCGCGGTCAACTTCTGGCAGGATCCGCGCTGGCCCGATCTCGGCGACCGCTGGGGCATC ATCCTCGAGGAACTGGTCACCGGCACCCGCACCGACGTCAAGGGCGGCCTCAACGAGCTCGAGGCCTACGCCAACGAACT GGCGAAGAAGAAATAG
Upstream 100 bases:
>100_bases CGACTTCGATCCCGGCCGCCAGAAGGTCGCCACCTATGGCGGCAAGGTCTGGTTCGCGCCGCTGACCGGCGGCGGCGACC TGATGGTCTACCGCAAGGAC
Downstream 100 bases:
>100_bases AGCCATCCTCCCGCCCGTGGCGCGCGGTCCGCGGCATTGTACGCAATGCCGGGACCTGCGCGCCGCGGGGACTTTGCCGA ACGAGGAAATCATGCCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWFDGDKPVFNSDAAVKATETYL KLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMAVDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADD ASKKCAGLFIAWATSKENEKRRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI ILEELVTGTRTDVKGGLNELEAYANELAKKK
Sequences:
>Translated_271_residues MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWFDGDKPVFNSDAAVKATETYL KLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMAVDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADD ASKKCAGLFIAWATSKENEKRRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI ILEELVTGTRTDVKGGLNELEAYANELAKKK >Mature_271_residues MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWFDGDKPVFNSDAAVKATETYL KLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMAVDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADD ASKKCAGLFIAWATSKENEKRRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI ILEELVTGTRTDVKGGLNELEAYANELAKKK
Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 28991; Mature: 28991
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWF CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC DGDKPVFNSDAAVKATETYLKLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMA CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEEEECCCCCCEE VDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADDASKKCAGLFIAWATSKENEK ECCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHEEEEEEECCCCCHH RRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI HHCCHHHCCCCCHHHHHCCCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH ILEELVTGTRTDVKGGLNELEAYANELAKKK HHHHHHCCCCHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWF CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC DGDKPVFNSDAAVKATETYLKLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMA CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEEEECCCCCCEE VDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADDASKKCAGLFIAWATSKENEK ECCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHEEEEEEECCCCCHH RRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI HHCCHHHCCCCCHHHHHCCCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH ILEELVTGTRTDVKGGLNELEAYANELAKKK HHHHHHCCCCHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]