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The map label for this gene is araC [C]

Identifier: 13474018

GI number: 13474018

Start: 3815428

End: 3815640

Strand: Direct

Name: araC [C]

Synonym: msr4796

Alternate gene names: 13474018

Gene position: 3815428-3815640 (Clockwise)

Preceding gene: 13474017

Following gene: 13474024

Centisome position: 54.23

GC content: 68.08

Gene sequence:

>213_bases
GTGCTGGGCAGCGGCGTCAAGCGCGTCGCCAGCGAGCGGCGGCTGCTGGAAGCCAAGCGGCTGCTGCTGTTCACCGTGCG
CACGGTCGAGGACATCGCCTACGAGATCGGCTTCGACGACCCCGCCTATTTCTCAAGGTTCTTCCGCGAACGGGTCGGCG
AAGCGCCTGCCGCCTGGCGGCGGAAGCAGCTGCAGGGCGCTGATCGCACATAG

Upstream 100 bases:

>100_bases
AACTTTCCACGGTCATGCGCATTTTCCGCGATAACTGGCCGGTCGACCTCTATGTCGAGATGCTGGCCACGACGTCGTCC
TCGACTTGGCCGCCCATGCG

Downstream 100 bases:

>100_bases
GTGGATGCGGGCCTCGCGACCCGCATCCAATTTTCCTGCTAGCGCCCCTGCTGCTGGCGCGCTTCCCGCTTCTTGCGCCA
GGGCGCGTTGGCTTCCCAGT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MLGSGVKRVASERRLLEAKRLLLFTVRTVEDIAYEIGFDDPAYFSRFFRERVGEAPAAWRRKQLQGADRT

Sequences:

>Translated_70_residues
MLGSGVKRVASERRLLEAKRLLLFTVRTVEDIAYEIGFDDPAYFSRFFRERVGEAPAAWRRKQLQGADRT
>Mature_70_residues
MLGSGVKRVASERRLLEAKRLLLFTVRTVEDIAYEIGFDDPAYFSRFFRERVGEAPAAWRRKQLQGADRT

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8118; Mature: 8118

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSGVKRVASERRLLEAKRLLLFTVRTVEDIAYEIGFDDPAYFSRFFRERVGEAPAAWR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
RKQLQGADRT
HHHHCCCCCC
>Mature Secondary Structure
MLGSGVKRVASERRLLEAKRLLLFTVRTVEDIAYEIGFDDPAYFSRFFRERVGEAPAAWR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
RKQLQGADRT
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA