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The map label for this gene is msmE [H]

Identifier: 13473999

GI number: 13473999

Start: 3793087

End: 3794346

Strand: Direct

Name: msmE [H]

Synonym: mlr4771

Alternate gene names: 13473999

Gene position: 3793087-3794346 (Clockwise)

Preceding gene: 13473998

Following gene: 13474000

Centisome position: 53.91

GC content: 63.02

Gene sequence:

>1260_bases
ATGACAACGAAATTACTGACGGCACTGCTTCTGGGCACAAGCATTCTCGGCTCGGCCGGGTTGGCTCACGCCGAGGACGT
AACGCTCAACATCGAAAGCTGGCGCGGCGACGACCTTGCCATCTGGAAGGACAAGCTGATCCCGGCCTTCGAAGCCAAGA
ATCCCGGCATCAAGGTGGTGTTCGCGCCATCGGCACCGACCGAATATGACGCCGCCCTCGGCGCCAAGCTCGCCGCCGGC
TCGGCGGGCGACCTGATCACCTGCCGCCCCTTCGACAAGTCGCTTGAACTCTACAAGAAGGGCAACCTCGCCGATCTCTC
GGCGCTGCCCGGCATGGAAAACTTCTCGCCCGTCGCCAAGTCCGCCTGGCAGACCGATGACGGCAAGGCGAGCTTCTGCG
TGCCGATGGCGTCGGTCATCCACGGCTTCATCTACAACAAGGACGCCTTCGACAAGCTCGGCATCAAGGTGCCGACGACC
CGCGACGAGTTCTTTGCCGCGCTCGACAAGATCAAGGCCGACGGCACCTACATCCCGATGGCGATGGGCACCAAGGATCT
CTGGGAAGCCGCGACCATGGGCTACCAGAACATCGGCCCCAACTACTGGAAGGGCGAGGACGGCCGTCAGGCACTGATCA
AGGGCACGCAGAAGCTGACCGACAAGGACTGGGTCGCTCCCTATGAGGAACTGGCCAAGTGGAAGCCGTATCTCGGCGAT
GGCTTCGAAGCGCAGACCTATCCGGACAGCCAGAACCTGTTCACGCTCGGCCGCGCCGCCATCTACCCGGCCGGCTCGTG
GGAAATCGGCCTGTTCAACACCCAGGCCCAGTTCAAGATGGGCGCCTTCCCGCCGCCGGTCGAGAAAGCCGGCGACACCT
GCTACATCTCCGACCATACCGATATCGGCATGGGCCTGAATGCAGCCTCCAAGCATGCCGACGCGGCCAAGACCTTCCTG
TCATGGGTGGCCTCGCCGGATTTCGCCACCATCTACGCCAACGCTCTGCCGGGCTTCTTCAGCCTGAACTCCTCGCCGGT
GAAGATGGCGGACCCGCTGGCGCAGGAATTCGTCTCCTGGCGCGGCAAGTGCAAGTCGACGATCCGCTCGACCTACCAGA
TCCTGTCGCGCGGCACGCCGAACCTCGAGAACGAGACCTGGGTTGAATCGGCCAACGTCATCAACGGCACCGACACGCCG
GAAGCCGCGGCCAAGAAGCTGCAGACCGGTCTCGACAGCTGGTATAAGCCGGCGAAGTAA

Upstream 100 bases:

>100_bases
AGCTGCGACCGGCGCTTTCCGCGATCGAGGGGAGCAAGGGGTCAAAAGCCTCTGTTCTCATCAAAACCGAACCTGAAAAA
GGTCAACAGGGAGACTGAGC

Downstream 100 bases:

>100_bases
GAGCTCAGGCAACGGAGCCGGCCGGGCGCATGCCTGGCCGGTTCCGGATACCCTGGCTTTCAGAATAAGTCCGTTCAGAT
AGCGATTGTCGGCACCGCCT

Product: secreted sugar-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTTKLLTALLLGTSILGSAGLAHAEDVTLNIESWRGDDLAIWKDKLIPAFEAKNPGIKVVFAPSAPTEYDAALGAKLAAG
SAGDLITCRPFDKSLELYKKGNLADLSALPGMENFSPVAKSAWQTDDGKASFCVPMASVIHGFIYNKDAFDKLGIKVPTT
RDEFFAALDKIKADGTYIPMAMGTKDLWEAATMGYQNIGPNYWKGEDGRQALIKGTQKLTDKDWVAPYEELAKWKPYLGD
GFEAQTYPDSQNLFTLGRAAIYPAGSWEIGLFNTQAQFKMGAFPPPVEKAGDTCYISDHTDIGMGLNAASKHADAAKTFL
SWVASPDFATIYANALPGFFSLNSSPVKMADPLAQEFVSWRGKCKSTIRSTYQILSRGTPNLENETWVESANVINGTDTP
EAAAKKLQTGLDSWYKPAK

Sequences:

>Translated_419_residues
MTTKLLTALLLGTSILGSAGLAHAEDVTLNIESWRGDDLAIWKDKLIPAFEAKNPGIKVVFAPSAPTEYDAALGAKLAAG
SAGDLITCRPFDKSLELYKKGNLADLSALPGMENFSPVAKSAWQTDDGKASFCVPMASVIHGFIYNKDAFDKLGIKVPTT
RDEFFAALDKIKADGTYIPMAMGTKDLWEAATMGYQNIGPNYWKGEDGRQALIKGTQKLTDKDWVAPYEELAKWKPYLGD
GFEAQTYPDSQNLFTLGRAAIYPAGSWEIGLFNTQAQFKMGAFPPPVEKAGDTCYISDHTDIGMGLNAASKHADAAKTFL
SWVASPDFATIYANALPGFFSLNSSPVKMADPLAQEFVSWRGKCKSTIRSTYQILSRGTPNLENETWVESANVINGTDTP
EAAAKKLQTGLDSWYKPAK
>Mature_418_residues
TTKLLTALLLGTSILGSAGLAHAEDVTLNIESWRGDDLAIWKDKLIPAFEAKNPGIKVVFAPSAPTEYDAALGAKLAAGS
AGDLITCRPFDKSLELYKKGNLADLSALPGMENFSPVAKSAWQTDDGKASFCVPMASVIHGFIYNKDAFDKLGIKVPTTR
DEFFAALDKIKADGTYIPMAMGTKDLWEAATMGYQNIGPNYWKGEDGRQALIKGTQKLTDKDWVAPYEELAKWKPYLGDG
FEAQTYPDSQNLFTLGRAAIYPAGSWEIGLFNTQAQFKMGAFPPPVEKAGDTCYISDHTDIGMGLNAASKHADAAKTFLS
WVASPDFATIYANALPGFFSLNSSPVKMADPLAQEFVSWRGKCKSTIRSTYQILSRGTPNLENETWVESANVINGTDTPE
AAAKKLQTGLDSWYKPAK

Specific function: Involved in a binding protein-dependent transport system responsible for the uptake of melibiose, raffinose and isomaltotriose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45462; Mature: 45331

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKLLTALLLGTSILGSAGLAHAEDVTLNIESWRGDDLAIWKDKLIPAFEAKNPGIKVV
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCCCCCEEEE
FAPSAPTEYDAALGAKLAAGSAGDLITCRPFDKSLELYKKGNLADLSALPGMENFSPVAK
ECCCCCCHHHHHHCCHHCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHCCCCCCCCHHHH
SAWQTDDGKASFCVPMASVIHGFIYNKDAFDKLGIKVPTTRDEFFAALDKIKADGTYIPM
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEE
AMGTKDLWEAATMGYQNIGPNYWKGEDGRQALIKGTQKLTDKDWVAPYEELAKWKPYLGD
ECCCHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
GFEAQTYPDSQNLFTLGRAAIYPAGSWEIGLFNTQAQFKMGAFPPPVEKAGDTCYISDHT
CCCCCCCCCCCCEEEECCEEECCCCCEEEEEECCCCCEECCCCCCCHHHCCCEEEEECCC
DIGMGLNAASKHADAAKTFLSWVASPDFATIYANALPGFFSLNSSPVKMADPLAQEFVSW
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCEEECCCCCCHHHHHHHHHHHHH
RGKCKSTIRSTYQILSRGTPNLENETWVESANVINGTDTPEAAAKKLQTGLDSWYKPAK
HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTKLLTALLLGTSILGSAGLAHAEDVTLNIESWRGDDLAIWKDKLIPAFEAKNPGIKVV
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCCCCCEEEE
FAPSAPTEYDAALGAKLAAGSAGDLITCRPFDKSLELYKKGNLADLSALPGMENFSPVAK
ECCCCCCHHHHHHCCHHCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHCCCCCCCCHHHH
SAWQTDDGKASFCVPMASVIHGFIYNKDAFDKLGIKVPTTRDEFFAALDKIKADGTYIPM
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEE
AMGTKDLWEAATMGYQNIGPNYWKGEDGRQALIKGTQKLTDKDWVAPYEELAKWKPYLGD
ECCCHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
GFEAQTYPDSQNLFTLGRAAIYPAGSWEIGLFNTQAQFKMGAFPPPVEKAGDTCYISDHT
CCCCCCCCCCCCEEEECCEEECCCCCEEEEEECCCCCEECCCCCCCHHHCCCEEEEECCC
DIGMGLNAASKHADAAKTFLSWVASPDFATIYANALPGFFSLNSSPVKMADPLAQEFVSW
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCEEECCCCCCHHHHHHHHHHHHH
RGKCKSTIRSTYQILSRGTPNLENETWVESANVINGTDTPEAAAKKLQTGLDSWYKPAK
HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1537846; 12397186 [H]