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The map label for this gene is bphR [H]

Identifier: 13473990

GI number: 13473990

Start: 3782230

End: 3782973

Strand: Direct

Name: bphR [H]

Synonym: mlr4761

Alternate gene names: 13473990

Gene position: 3782230-3782973 (Clockwise)

Preceding gene: 13473989

Following gene: 13473991

Centisome position: 53.75

GC content: 61.56

Gene sequence:

>744_bases
TTGACATATGGAGCTGCCAACCTGAACGACGACGGCACAGGATCCAAGAGCACACTCGCCAGCACGGTCTATCACCAATT
GCGGGATGATCTTCTCGGCGGCGCTCTTGAAACCGAAAGCAAACTGCGGGTCGAGTGGGTTGTTTCCAAATATGGCGCCG
GCGCTTCGCCGGTTCGTGAAGCTCTTAATCGCCTTGCCTCCGAAGGACTTCTTGGTCGCCACGACCAGCGTGGCTTTTTC
ATCATGCCGGTCAGTGCGGCGGAGCTCGAGGAGCTGACGCGGACCCGCTGCTGGCTCGAGGAGCGGGCGCTTCGCGAATC
CATCGCCCACCGCACCGCCGAATGGGAAGAACAGCTGGTGCTGGCGCTGCATCGCCTGGGCCGCGCCTCGCGTCTTTCGC
CGCAAAATGCCACGTCGCTCGATCCGGACTGGGAGAAATTGCACCGCACCTTTCATCGGGTGCTGATCTCGGCCTGCCGG
TCGCACTGGCTGGTGGGTTTCTGCGATCAGCTTTCCGATCACGCCTATCGCTACCGGCAAATGGCCAATGACGGCGAAAG
CATCCCGCGCGACGATTTCGCCGAACACCGGCAGATCGCCGAATACGCGCTGGACGGCAATGCCGACGAGGCCGTCAAGG
CCTTGATCGATCACTACCAGCTGACCGCTTCCATATGCATGGAACGTTTCAAGCAAGGCGAAGTCGCAAAGGTCGCCGCC
TCGGCCGAACGCGCCCGGCGGTAA

Upstream 100 bases:

>100_bases
TCTGCTTGAGCCGCTTGACGCAGACACTGTATGGTACAAGTACGAAAGGGTTGTTTAGGACTCGCATTGCCCGGAGAAAA
ATGGGGACAAGGAGTCAACC

Downstream 100 bases:

>100_bases
CGATCTTTCCTTCGGCGCCTTGGCGCAATCCTCGCGACCGTTCGGCGGACGTGAGGTGCCGGACCGCCGTTTGCGGTCTT
GACGGCATGGCCGGGAAACG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTYGAANLNDDGTGSKSTLASTVYHQLRDDLLGGALETESKLRVEWVVSKYGAGASPVREALNRLASEGLLGRHDQRGFF
IMPVSAAELEELTRTRCWLEERALRESIAHRTAEWEEQLVLALHRLGRASRLSPQNATSLDPDWEKLHRTFHRVLISACR
SHWLVGFCDQLSDHAYRYRQMANDGESIPRDDFAEHRQIAEYALDGNADEAVKALIDHYQLTASICMERFKQGEVAKVAA
SAERARR

Sequences:

>Translated_247_residues
MTYGAANLNDDGTGSKSTLASTVYHQLRDDLLGGALETESKLRVEWVVSKYGAGASPVREALNRLASEGLLGRHDQRGFF
IMPVSAAELEELTRTRCWLEERALRESIAHRTAEWEEQLVLALHRLGRASRLSPQNATSLDPDWEKLHRTFHRVLISACR
SHWLVGFCDQLSDHAYRYRQMANDGESIPRDDFAEHRQIAEYALDGNADEAVKALIDHYQLTASICMERFKQGEVAKVAA
SAERARR
>Mature_246_residues
TYGAANLNDDGTGSKSTLASTVYHQLRDDLLGGALETESKLRVEWVVSKYGAGASPVREALNRLASEGLLGRHDQRGFFI
MPVSAAELEELTRTRCWLEERALRESIAHRTAEWEEQLVLALHRLGRASRLSPQNATSLDPDWEKLHRTFHRVLISACRS
HWLVGFCDQLSDHAYRYRQMANDGESIPRDDFAEHRQIAEYALDGNADEAVKALIDHYQLTASICMERFKQGEVAKVAAS
AERARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=157, Percent_Identity=31.2101910828025, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27864; Mature: 27733

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYGAANLNDDGTGSKSTLASTVYHQLRDDLLGGALETESKLRVEWVVSKYGAGASPVRE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHH
ALNRLASEGLLGRHDQRGFFIMPVSAAELEELTRTRCWLEERALRESIAHRTAEWEEQLV
HHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALHRLGRASRLSPQNATSLDPDWEKLHRTFHRVLISACRSHWLVGFCDQLSDHAYRYRQ
HHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MANDGESIPRDDFAEHRQIAEYALDGNADEAVKALIDHYQLTASICMERFKQGEVAKVAA
HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
SAERARR
HHHHHCC
>Mature Secondary Structure 
TYGAANLNDDGTGSKSTLASTVYHQLRDDLLGGALETESKLRVEWVVSKYGAGASPVRE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHH
ALNRLASEGLLGRHDQRGFFIMPVSAAELEELTRTRCWLEERALRESIAHRTAEWEEQLV
HHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALHRLGRASRLSPQNATSLDPDWEKLHRTFHRVLISACRSHWLVGFCDQLSDHAYRYRQ
HHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MANDGESIPRDDFAEHRQIAEYALDGNADEAVKALIDHYQLTASICMERFKQGEVAKVAA
HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
SAERARR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]