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The map label for this gene is cbbE [H]

Identifier: 13473989

GI number: 13473989

Start: 3781227

End: 3781904

Strand: Direct

Name: cbbE [H]

Synonym: mlr4760

Alternate gene names: 13473989

Gene position: 3781227-3781904 (Clockwise)

Preceding gene: 13473988

Following gene: 13473990

Centisome position: 53.74

GC content: 64.16

Gene sequence:

>678_bases
ATGAGCACAAAGACCTTGATCGCACCTTCGGTGCTGGCTTCGGACTTTTCGAAGCTCGGCGACGAGGTCGAAGCCGTCGC
GGCCGCGGGCGCCGACTGGATCCATCTCGATGTCATGGATGGCCATTTCGTCCCCAACATCACCTTCGGCCCGCCCGTCA
TCAAGGCGATCCGCAACCGCACCAAGGCCTTCTTCGACTGCCATCTGATGATTGCGCCGGCCGATCCCTATCTCGCCGCC
TTCGCCGAAGCCGGCTGTGACGGCATGACGGTGCATGCCGAGGCCGGACCGCATCTCGACCGCTCGCTGCAGACCATCAG
GAATCTTGGCAAGAAGGCCGGTGTGTCGCTCAATCCGGCGACGCCGGAAACGATGATCGAATATGTGCTCGACCGGCTCG
ACCTGATCCTGATCATGACCGTCAATCCGGGCTTCGGCGGCCAGGCCTTCATCCCGGGGATCGTCGACAAGGTGAGAAGG
GTCAAGGCGCTGATCGGCGACCGGCCGATCCGCATCGAGATCGATGGCGGCGTTTCGCCCGAAACGGCGCCCCTGGTCAC
GGCAGCCGGCGCCGATGTGCTGGTGGCGGGTGCGGCCATCTTCAAAGGCGGCAGTGTCGAAGCCTACCGCGCCAACATCG
AAGCGATCAGGACAGCGGCCGACAAGGCCGCCGGCTGA

Upstream 100 bases:

>100_bases
TGGAGCCGCCACGCCTGCACCCTCGACAAGTCACCCGCCGGGCATTAGGCAGTCGGTCCAGAGTGACCGGTATGAAAAGG
GCGCCCGGAAAGGCCTCGAG

Downstream 100 bases:

>100_bases
CGCGCCACCACGAATCAGATTCGCTGAAAGGCCTGATTCGGGCGAACCGCCCGCTGTCTTTGCGCGCGACAGAAAAGATG
CTCGCACAGGCACACGCCAA

Product: pentose(ribulose)-5-phosphate-3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSTKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNRTKAFFDCHLMIAPADPYLAA
FAEAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPATPETMIEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRR
VKALIGDRPIRIEIDGGVSPETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAADKAAG

Sequences:

>Translated_225_residues
MSTKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNRTKAFFDCHLMIAPADPYLAA
FAEAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPATPETMIEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRR
VKALIGDRPIRIEIDGGVSPETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAADKAAG
>Mature_224_residues
STKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNRTKAFFDCHLMIAPADPYLAAF
AEAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPATPETMIEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRRV
KALIGDRPIRIEIDGGVSPETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAADKAAG

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=226, Percent_Identity=38.0530973451327, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI219879828, Length=226, Percent_Identity=36.283185840708, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI24307923, Length=175, Percent_Identity=29.1428571428571, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1789788, Length=224, Percent_Identity=47.7678571428571, Blast_Score=209, Evalue=1e-55,
Organism=Escherichia coli, GI1790523, Length=196, Percent_Identity=37.7551020408163, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1790754, Length=213, Percent_Identity=31.924882629108, Blast_Score=101, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=210, Percent_Identity=40.9523809523809, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6322341, Length=211, Percent_Identity=41.2322274881517, Blast_Score=169, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24586301, Length=202, Percent_Identity=40.0990099009901, Blast_Score=156, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23584; Mature: 23453

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH
TKAFFDCHLMIAPADPYLAAFAEAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPA
HHEEEEEEEEEECCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC
TPETMIEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRRVKALIGDRPIRIEIDGGVSP
CHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
ETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAADKAAG
CCCCEEEECCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNR
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH
TKAFFDCHLMIAPADPYLAAFAEAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPA
HHEEEEEEEEEECCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC
TPETMIEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRRVKALIGDRPIRIEIDGGVSP
CHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
ETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAADKAAG
CCCCEEEECCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA