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The map label for this gene is (hspc4-1 [H]

Identifier: 13473956

GI number: 13473956

Start: 3747440

End: 3747937

Strand: Direct

Name: (hspc4-1 [H]

Synonym: mlr4720

Alternate gene names: 13473956

Gene position: 3747440-3747937 (Clockwise)

Preceding gene: 13473955

Following gene: 13473957

Centisome position: 53.26

GC content: 58.23

Gene sequence:

>498_bases
ATGGGCGATGAAGAGCGGCGATGGCCCTGCTCCAGGAAATCTGAGGGCGTTGCGGGGCGGCTTTCCGAGGATGAGACAAT
GATTGCACGGATGCTATTCGGAGCAGATCCTTACCGAAACATGCGCCGCCTCCAAGACGAAGTGAGCCGCCTGGAATTCC
CGGCGGTGAATGCCTTCGTAAACCAGGACGGCGTCATCATCACCGCCGAACTGCCTGGGGTAAGATCAGAAGACTTGGAC
ATCTTGATTCACCGAGATTCCGTTACTCTCAGCGGAGAGCGGCAAGCCGAAGCTGAGGATGCCCGGCGGGGATACCACCG
GCGCGAGCGTCGTCAAGGCCGGTTTGTGCGGACTGTGTCATTGCCGTTTTTGGTCGACCCGAACAATGTTGGGGCGAATC
TCATCAATGGCCTACTGACCCTAGGTCTTCCTCGGGCCGAAGAGGACAAGCCAAAGCGCATTCACGTGAATGCGAGCAAG
GAGGCGCGTCATGGCTAA

Upstream 100 bases:

>100_bases
ACATGATGGACGAACCTGCGGCACCACCTGGGCGACTCTGGGGTTGAGAGCTGGAAGGTGGGAGCCGCGGGTTCGGCACT
TCGCTCATGGCACACCGCCG

Downstream 100 bases:

>100_bases
GAGAGAGGCCTTGAGAGCGGGAAGCAAGGCGAGCAGGCAGGCCACGCCGAATAGCCAACCGGAATTGGAGGGCAAGCTGT
TCGCGGAGCAGGACGCGGGC

Product: small heat-shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MGDEERRWPCSRKSEGVAGRLSEDETMIARMLFGADPYRNMRRLQDEVSRLEFPAVNAFVNQDGVIITAELPGVRSEDLD
ILIHRDSVTLSGERQAEAEDARRGYHRRERRQGRFVRTVSLPFLVDPNNVGANLINGLLTLGLPRAEEDKPKRIHVNASK
EARHG

Sequences:

>Translated_165_residues
MGDEERRWPCSRKSEGVAGRLSEDETMIARMLFGADPYRNMRRLQDEVSRLEFPAVNAFVNQDGVIITAELPGVRSEDLD
ILIHRDSVTLSGERQAEAEDARRGYHRRERRQGRFVRTVSLPFLVDPNNVGANLINGLLTLGLPRAEEDKPKRIHVNASK
EARHG
>Mature_164_residues
GDEERRWPCSRKSEGVAGRLSEDETMIARMLFGADPYRNMRRLQDEVSRLEFPAVNAFVNQDGVIITAELPGVRSEDLDI
LIHRDSVTLSGERQAEAEDARRGYHRRERRQGRFVRTVSLPFLVDPNNVGANLINGLLTLGLPRAEEDKPKRIHVNASKE
ARHG

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18716; Mature: 18585

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDEERRWPCSRKSEGVAGRLSEDETMIARMLFGADPYRNMRRLQDEVSRLEFPAVNAFV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHEEE
NQDGVIITAELPGVRSEDLDILIHRDSVTLSGERQAEAEDARRGYHRRERRQGRFVRTVS
CCCCEEEEEECCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
LPFLVDPNNVGANLINGLLTLGLPRAEEDKPKRIHVNASKEARHG
CCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
GDEERRWPCSRKSEGVAGRLSEDETMIARMLFGADPYRNMRRLQDEVSRLEFPAVNAFV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHEEE
NQDGVIITAELPGVRSEDLDILIHRDSVTLSGERQAEAEDARRGYHRRERRQGRFVRTVS
CCCCEEEEEECCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
LPFLVDPNNVGANLINGLLTLGLPRAEEDKPKRIHVNASKEARHG
CCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA