| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473945
Identifier: 13473945
GI number: 13473945
Start: 3735566
End: 3736474
Strand: Direct
Name: 13473945
Synonym: mlr4706
Alternate gene names: NA
Gene position: 3735566-3736474 (Clockwise)
Preceding gene: 13473935
Following gene: 13473950
Centisome position: 53.09
GC content: 54.24
Gene sequence:
>909_bases ATGTCAACGGATCACGAATTTGGCAGTCTCTCCACCGATCTCAAACTCTCGGTTGTCGAGGAGTACTTGAGAGCTTTCAC ACTGGCTCTCCATTCAAAATTTCCTGAGCTTTGGTATATCGACGCATTTGCCGGCACCGGAGAACGGACAGTTAGAGTTG CGGGAGCCATCGCTACTGACTTACTGCCGGCACTTGAGAAGCGCATAGAGCGTAGAAGGGGCTCCGCCCGCATCGCATTG GATATCACCCCTCATTTTAGCCGCTATATTTTCATGGACAAAATGAGGCGCCATTGTGCGGCGCTGCGATGCTTGGCCAA TGAGTACCCAGATCGTTCTATTGACATCGTGCGGGGTGATGCCAACGAGGCGATCAAGGCCGAACTCGCTTCTCAGCGGT GGGTCGGAAAAAGGGCCGTGATGTTTTTAGATCCTTACGGAATGGATGTCGCTTGGTCGACCCTCGAGGCAATACGAAAA ACCGAAGCAATTGACGTCTGGTATCTCGTCTCACTCGCCGGAATGTTTAGGCAGGCTACGCACGATCCGAAAAAGCTGAC TGCGGACAAACGAGCCGCGCTTACGCGCATGCTGGGAACCGACGGGTGGGAAGACGCTTGGTATCGGAGGGAGCAAAGCA CCGATCTGCTTGGCCAAGTCGACGAAACTCATCAACGAGTCGCTGATGTCGCCGCGATGGAGCAGTTTGTCGGCAAACGA CTTGCAAGTCTCTTTCCGAAGGTCTTGCCCCCAAGGCGCCTTCGCAACGACAGGGGCGCGCCAATGTTCTCGCTTTTTCT GGCCATTTCAAACCCGGAACCGAAAGCTATCGGGCTGGCCACAAGAATAGGGAATCACATTCTCAAGGCATCGATGGAGC CGGCATCTCGTCATAAAGGCGGCCATTGA
Upstream 100 bases:
>100_bases GCGGTGCCGGGACAAGGCCACCGGGCGTTTCGTCGATGACTTCTACTGCAACGGTGAGCCTATGCTCGACAGCACATGGC CCGGCTGGTCAGCCTAACGA
Downstream 100 bases:
>100_bases GGGTCCGGCCGGCGGCCTTTTTGTTTTTGCCGCCCCACTGCTTGAAAAAGAACGCTGCCCCCTGGTCCCGACACATACTT TCGATCTCGTCGACCCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSTDHEFGSLSTDLKLSVVEEYLRAFTLALHSKFPELWYIDAFAGTGERTVRVAGAIATDLLPALEKRIERRRGSARIAL DITPHFSRYIFMDKMRRHCAALRCLANEYPDRSIDIVRGDANEAIKAELASQRWVGKRAVMFLDPYGMDVAWSTLEAIRK TEAIDVWYLVSLAGMFRQATHDPKKLTADKRAALTRMLGTDGWEDAWYRREQSTDLLGQVDETHQRVADVAAMEQFVGKR LASLFPKVLPPRRLRNDRGAPMFSLFLAISNPEPKAIGLATRIGNHILKASMEPASRHKGGH
Sequences:
>Translated_302_residues MSTDHEFGSLSTDLKLSVVEEYLRAFTLALHSKFPELWYIDAFAGTGERTVRVAGAIATDLLPALEKRIERRRGSARIAL DITPHFSRYIFMDKMRRHCAALRCLANEYPDRSIDIVRGDANEAIKAELASQRWVGKRAVMFLDPYGMDVAWSTLEAIRK TEAIDVWYLVSLAGMFRQATHDPKKLTADKRAALTRMLGTDGWEDAWYRREQSTDLLGQVDETHQRVADVAAMEQFVGKR LASLFPKVLPPRRLRNDRGAPMFSLFLAISNPEPKAIGLATRIGNHILKASMEPASRHKGGH >Mature_301_residues STDHEFGSLSTDLKLSVVEEYLRAFTLALHSKFPELWYIDAFAGTGERTVRVAGAIATDLLPALEKRIERRRGSARIALD ITPHFSRYIFMDKMRRHCAALRCLANEYPDRSIDIVRGDANEAIKAELASQRWVGKRAVMFLDPYGMDVAWSTLEAIRKT EAIDVWYLVSLAGMFRQATHDPKKLTADKRAALTRMLGTDGWEDAWYRREQSTDLLGQVDETHQRVADVAAMEQFVGKRL ASLFPKVLPPRRLRNDRGAPMFSLFLAISNPEPKAIGLATRIGNHILKASMEPASRHKGGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34080; Mature: 33948
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDHEFGSLSTDLKLSVVEEYLRAFTLALHSKFPELWYIDAFAGTGERTVRVAGAIATD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEHHHHHHHH LLPALEKRIERRRGSARIALDITPHFSRYIFMDKMRRHCAALRCLANEYPDRSIDIVRGD HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC ANEAIKAELASQRWVGKRAVMFLDPYGMDVAWSTLEAIRKTEAIDVWYLVSLAGMFRQAT CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HDPKKLTADKRAALTRMLGTDGWEDAWYRREQSTDLLGQVDETHQRVADVAAMEQFVGKR CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LASLFPKVLPPRRLRNDRGAPMFSLFLAISNPEPKAIGLATRIGNHILKASMEPASRHKG HHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHCCCC GH CC >Mature Secondary Structure STDHEFGSLSTDLKLSVVEEYLRAFTLALHSKFPELWYIDAFAGTGERTVRVAGAIATD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEHHHHHHHH LLPALEKRIERRRGSARIALDITPHFSRYIFMDKMRRHCAALRCLANEYPDRSIDIVRGD HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC ANEAIKAELASQRWVGKRAVMFLDPYGMDVAWSTLEAIRKTEAIDVWYLVSLAGMFRQAT CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HDPKKLTADKRAALTRMLGTDGWEDAWYRREQSTDLLGQVDETHQRVADVAAMEQFVGKR CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LASLFPKVLPPRRLRNDRGAPMFSLFLAISNPEPKAIGLATRIGNHILKASMEPASRHKG HHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHCCCC GH CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA