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The map label for this gene is 13473937

Identifier: 13473937

GI number: 13473937

Start: 3726289

End: 3726465

Strand: Reverse

Name: 13473937

Synonym: msl4696

Alternate gene names: NA

Gene position: 3726465-3726289 (Counterclockwise)

Preceding gene: 13473938

Following gene: 13473936

Centisome position: 52.96

GC content: 51.41

Gene sequence:

>177_bases
GTGGCTCACAAGTTCGAGATATACAAGGACAAGGCCGGCGAATATCGCGTTCGCTTCAAATACAACAGCGAAGTGATGTT
CTCTACTGAGGGCTATTCAACCAAGGCCGGCGCCCAAAACGCCATCGATTCAATCAAGAAAAACGGCCCGAACGCGCCCG
TTGAGGATAACAGCTAG

Upstream 100 bases:

>100_bases
GCGGCATCATAAGCCAACTTGTTGCCGGCGGCGCGGGCGGCGCAATTCTGACCGCGATCATCGCCGCGATTAAAAACCGT
TCCGCGTAGGAGGAGAAAAC

Downstream 100 bases:

>100_bases
AGTGCGATTGCTTAACAATAACTAGCCTTCAGGATTGATCTACTAGACCGTATTGAAATCGCCTTAGCCGTCTAAGCGTG
GAATCATCGGCGCCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MAHKFEIYKDKAGEYRVRFKYNSEVMFSTEGYSTKAGAQNAIDSIKKNGPNAPVEDNS

Sequences:

>Translated_58_residues
MAHKFEIYKDKAGEYRVRFKYNSEVMFSTEGYSTKAGAQNAIDSIKKNGPNAPVEDNS
>Mature_57_residues
AHKFEIYKDKAGEYRVRFKYNSEVMFSTEGYSTKAGAQNAIDSIKKNGPNAPVEDNS

Specific function: Unknown

COG id: COG3422

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0339 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YAG6_RHILO (Q98DI0)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105505.1
- ProteinModelPortal:   Q98DI0
- SMR:   Q98DI0
- GeneID:   1228166
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:msl4696
- NMPDR:   fig|266835.1.peg.3609
- HOGENOM:   HBG451093
- OMA:   FRFRFKA
- ProtClustDB:   CLSK784158
- InterPro:   IPR010879

Pfam domain/function: PF07411 DUF1508

EC number: NA

Molecular weight: Translated: 6534; Mature: 6403

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHKFEIYKDKAGEYRVRFKYNSEVMFSTEGYSTKAGAQNAIDSIKKNGPNAPVEDNS
CCCCCCEEECCCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AHKFEIYKDKAGEYRVRFKYNSEVMFSTEGYSTKAGAQNAIDSIKKNGPNAPVEDNS
CCCCCEEECCCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968