| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yjeS [H]
Identifier: 13473891
GI number: 13473891
Start: 3674507
End: 3675661
Strand: Direct
Name: yjeS [H]
Synonym: mlr4636
Alternate gene names: 13473891
Gene position: 3674507-3675661 (Clockwise)
Preceding gene: 13473890
Following gene: 13473892
Centisome position: 52.22
GC content: 67.45
Gene sequence:
>1155_bases ATGCGGACCTCGACTTCTGACGCCGCAAAACTGCGCGCGCTGATCGACGCGGAGGCGCATCGCGCCGGCTTCGATGCCAT TGCCGTCACCACCCCCGATGCGATCCCGCTGGCACCGGCGCGCCTGGCCGAATTCGTCGCCGACGGCTTTCACGGCTCGA TGGACTGGATCGCCGAGACGATTGCAAGGCGAAGCGAGCCTTCCACGCTTTGGCCTGACGTGCGCTCGATCGTCGTGCTG GCAATGAACTATGGGCCGGACCATGATCCGCGTGTGCTGCAGGCCAGGCATGACCGGGGCGCCATCTCCGTCTATGCGCA GAACCGCGATTATCACGATGTGATGAAAGGCCGGCTGAAGGAAATCGCCGGCAAGATCGTCGCGCGCGCCGGCGGCGACG TGAAGGTGTTCGTCGACACCGCGCCGGTGATGGAAAAGCCGCTGGCGCAAGCCGCGGGTCTCGGCTGGCAGGGAAAACAC ACCAATCTGGTCAGCCGCGAGCACGGCTCCTGGCTGTTCCTCGGCACCATCTTCACCACGGCAGAACTCGCGCCCGACCG GGCCGAGATCGACCATTGCGGTTCCTGCCGCGCCTGCCTCGACGCCTGCCCGACCGATGCCTTCCCGGCGCCTTACCGGC TCGATGCGCGGCGCTGCATTTCCTACCTCACCATCGAGAACAAGGGGCCGATCCCGCATGAATTCCGCGAAAAGATCGGC AACCGCATCTATGGCTGCGACGATTGCCTGGCCGCCTGCCCGTGGAACAAGTTCGCCCGGGCGGCGTCCGAGGCAAAGCT CGCGGCGCGCGACGATCTGCGCGCGCCGCCGCTCGCCGACCTGCTCGAACTGGACGATGCGGCCTTCCGCGTCTTCTTCT CCGGCTCGCCGATCAAGCGCATCGGCCGCGACCGCTTCATCCGCAACGTGCTGATCGCCGCCGGCAATTCCGGCGATGTC GTCCTGGCCGTCCCGGTGCGTGCGCTGGTTGGCGATCCCTCGCCGCTGGTGCGGGGCGCGGCAATATGGGCGCTGGCGCG GCTGGTGCCTGACGCCGAATATTCCGAGCGGGCCGCGACCGGTCTGAAAGCCGAGAACGATGCGGCGGTGCGCGAGGAAT GGCGCCTGGCGCGGCCAGACAGGGCGCACGCATGA
Upstream 100 bases:
>100_bases CACGCCGCGGCGCGCGAATGGTATACGCGGGTGAAGTCGCGGCCCTCCTTCCGGCCGCTCTTGACCGACCGCGTGCGCGG CCTGTCGCCGGTGTCGCATT
Downstream 100 bases:
>100_bases GCGAAAAGCAGATCTTGATCTTCGGCGCCGGTTATTCCGGCAAGGCCTTTGCCCGCGCCAACAGGGATGCCGCCACGATC CTTGGCACCACACGGTCCAG
Product: iron-sulfur cluster binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MRTSTSDAAKLRALIDAEAHRAGFDAIAVTTPDAIPLAPARLAEFVADGFHGSMDWIAETIARRSEPSTLWPDVRSIVVL AMNYGPDHDPRVLQARHDRGAISVYAQNRDYHDVMKGRLKEIAGKIVARAGGDVKVFVDTAPVMEKPLAQAAGLGWQGKH TNLVSREHGSWLFLGTIFTTAELAPDRAEIDHCGSCRACLDACPTDAFPAPYRLDARRCISYLTIENKGPIPHEFREKIG NRIYGCDDCLAACPWNKFARAASEAKLAARDDLRAPPLADLLELDDAAFRVFFSGSPIKRIGRDRFIRNVLIAAGNSGDV VLAVPVRALVGDPSPLVRGAAIWALARLVPDAEYSERAATGLKAENDAAVREEWRLARPDRAHA
Sequences:
>Translated_384_residues MRTSTSDAAKLRALIDAEAHRAGFDAIAVTTPDAIPLAPARLAEFVADGFHGSMDWIAETIARRSEPSTLWPDVRSIVVL AMNYGPDHDPRVLQARHDRGAISVYAQNRDYHDVMKGRLKEIAGKIVARAGGDVKVFVDTAPVMEKPLAQAAGLGWQGKH TNLVSREHGSWLFLGTIFTTAELAPDRAEIDHCGSCRACLDACPTDAFPAPYRLDARRCISYLTIENKGPIPHEFREKIG NRIYGCDDCLAACPWNKFARAASEAKLAARDDLRAPPLADLLELDDAAFRVFFSGSPIKRIGRDRFIRNVLIAAGNSGDV VLAVPVRALVGDPSPLVRGAAIWALARLVPDAEYSERAATGLKAENDAAVREEWRLARPDRAHA >Mature_384_residues MRTSTSDAAKLRALIDAEAHRAGFDAIAVTTPDAIPLAPARLAEFVADGFHGSMDWIAETIARRSEPSTLWPDVRSIVVL AMNYGPDHDPRVLQARHDRGAISVYAQNRDYHDVMKGRLKEIAGKIVARAGGDVKVFVDTAPVMEKPLAQAAGLGWQGKH TNLVSREHGSWLFLGTIFTTAELAPDRAEIDHCGSCRACLDACPTDAFPAPYRLDARRCISYLTIENKGPIPHEFREKIG NRIYGCDDCLAACPWNKFARAASEAKLAARDDLRAPPLADLLELDDAAFRVFFSGSPIKRIGRDRFIRNVLIAAGNSGDV VLAVPVRALVGDPSPLVRGAAIWALARLVPDAEYSERAATGLKAENDAAVREEWRLARPDRAHA
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=346, Percent_Identity=37.5722543352601, Blast_Score=247, Evalue=7e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 41858; Mature: 41858
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSTSDAAKLRALIDAEAHRAGFDAIAVTTPDAIPLAPARLAEFVADGFHGSMDWIAET CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHH IARRSEPSTLWPDVRSIVVLAMNYGPDHDPRVLQARHDRGAISVYAQNRDYHDVMKGRLK HHHCCCCCCCCHHHHEEEEEEECCCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHH EIAGKIVARAGGDVKVFVDTAPVMEKPLAQAAGLGWQGKHTNLVSREHGSWLFLGTIFTT HHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEHHHHH AELAPDRAEIDHCGSCRACLDACPTDAFPAPYRLDARRCISYLTIENKGPIPHEFREKIG HHCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHC NRIYGCDDCLAACPWNKFARAASEAKLAARDDLRAPPLADLLELDDAAFRVFFSGSPIKR CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHEEEEECCCCHHH IGRDRFIRNVLIAAGNSGDVVLAVPVRALVGDPSPLVRGAAIWALARLVPDAEYSERAAT HHHHHHHHHHHEEECCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHC GLKAENDAAVREEWRLARPDRAHA CCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRTSTSDAAKLRALIDAEAHRAGFDAIAVTTPDAIPLAPARLAEFVADGFHGSMDWIAET CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHH IARRSEPSTLWPDVRSIVVLAMNYGPDHDPRVLQARHDRGAISVYAQNRDYHDVMKGRLK HHHCCCCCCCCHHHHEEEEEEECCCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHH EIAGKIVARAGGDVKVFVDTAPVMEKPLAQAAGLGWQGKHTNLVSREHGSWLFLGTIFTT HHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEHHHHH AELAPDRAEIDHCGSCRACLDACPTDAFPAPYRLDARRCISYLTIENKGPIPHEFREKIG HHCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHC NRIYGCDDCLAACPWNKFARAASEAKLAARDDLRAPPLADLLELDDAAFRVFFSGSPIKR CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHEEEEECCCCHHH IGRDRFIRNVLIAAGNSGDVVLAVPVRALVGDPSPLVRGAAIWALARLVPDAEYSERAAT HHHHHHHHHHHEEECCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHC GLKAENDAAVREEWRLARPDRAHA CCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]