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The map label for this gene is yraN [C]

Identifier: 13473888

GI number: 13473888

Start: 3672408

End: 3672785

Strand: Direct

Name: yraN [C]

Synonym: mlr4633

Alternate gene names: 13473888

Gene position: 3672408-3672785 (Clockwise)

Preceding gene: 13473887

Following gene: 13473890

Centisome position: 52.19

GC content: 67.99

Gene sequence:

>378_bases
GTGGCTGAGCGCCCGAGCGCCAGCCGCCAGAAAGCCTATCGGCGCGGCCATCGCGGCGAGTGGCTGGCGGCCGCCGCGCT
GATGCTGAAGGGCTACCGCATCCTCGCGCGCCGCCATCGCACCCGCTTCGGCGAAATCGACCTGATCGCGCGGCGTGGCG
ACCTGGTGGTGTTCGTCGAGGTCAAGGCGCGGCGTTCGCTGATGGAAGCGATGGAAGCGATCGGCCACGAATCGGAGCGC
CGCATCGAGGCTGCCGCCGACATCTGGCTGTCACGGCAGGCGGATTATGGCAGGCTGTCGATGCGCTTCGACATGGTCGC
GGTGCTGCCCTGGCGCTGGCCGGTGCATGTCGAGAACGCGTTTTATGGGCGGAATTAG

Upstream 100 bases:

>100_bases
TCCAAGGCGGCCTCGGAGGCCGCGAAGATGACCGGCGGCCAGAAACAGGCGCTTTACCGGCGGCTGCTGGAGCTCAAGGA
CACCTCAGGAGAAGGCGACG

Downstream 100 bases:

>100_bases
AGGGCTTTGCCGAAGGCGAACCTGCGAGACGTCGGCGGGTCAGCGAAGGAACTCGGCGGCGCAGTAAGGGAACGACCTAC
GCTCACCCCCAGATCATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAERPSASRQKAYRRGHRGEWLAAAALMLKGYRILARRHRTRFGEIDLIARRGDLVVFVEVKARRSLMEAMEAIGHESER
RIEAAADIWLSRQADYGRLSMRFDMVAVLPWRWPVHVENAFYGRN

Sequences:

>Translated_125_residues
MAERPSASRQKAYRRGHRGEWLAAAALMLKGYRILARRHRTRFGEIDLIARRGDLVVFVEVKARRSLMEAMEAIGHESER
RIEAAADIWLSRQADYGRLSMRFDMVAVLPWRWPVHVENAFYGRN
>Mature_124_residues
AERPSASRQKAYRRGHRGEWLAAAALMLKGYRILARRHRTRFGEIDLIARRGDLVVFVEVKARRSLMEAMEAIGHESERR
IEAAADIWLSRQADYGRLSMRFDMVAVLPWRWPVHVENAFYGRN

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4633_RHILO (Q98DM8)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105456.1
- ProteinModelPortal:   Q98DM8
- GeneID:   1228117
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr4633
- NMPDR:   fig|266835.1.peg.3560
- HOGENOM:   HBG710155
- OMA:   QRYDIVA
- ProtClustDB:   PRK12497
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14610; Mature: 14479

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERPSASRQKAYRRGHRGEWLAAAALMLKGYRILARRHRTRFGEIDLIARRGDLVVFVE
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEE
VKARRSLMEAMEAIGHESERRIEAAADIWLSRQADYGRLSMRFDMVAVLPWRWPVHVENA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCEEECCC
FYGRN
CCCCC
>Mature Secondary Structure 
AERPSASRQKAYRRGHRGEWLAAAALMLKGYRILARRHRTRFGEIDLIARRGDLVVFVE
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEE
VKARRSLMEAMEAIGHESERRIEAAADIWLSRQADYGRLSMRFDMVAVLPWRWPVHVENA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCEEECCC
FYGRN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968