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The map label for this gene is rsmI

Identifier: 13473887

GI number: 13473887

Start: 3671531

End: 3672415

Strand: Direct

Name: rsmI

Synonym: mlr4632

Alternate gene names: 13473887

Gene position: 3671531-3672415 (Clockwise)

Preceding gene: 13473884

Following gene: 13473888

Centisome position: 52.18

GC content: 69.6

Gene sequence:

>885_bases
GTGGTCGGGCAGACCGAAATCCCCGCCCGTCCGCTCGAGCCGGCGCTCTATCTGGTGGCGACGCCGATCGGCAATCTCGC
CGACATCACTTTGCGCGCGCTGGAGACGCTGGCCGCCGCCGACATCGTCGCTTGCGAGGACACCAGGGTGTCGCGCGTGC
TGCTCGACCGCTACGGCATTCGCCGCCGCACGACGGCCTATCATGAGCACAATGCCGGTGAGGCCGGGCCGAAGCTGATC
GCGGCGCTTCAAGGCGGCCAGAGCGTGGCGCTGATTTCCGATGCCGGCACGCCGCTGGTTTCCGATCCCGGCTACCGGCT
GGTCGGGGAAGCGATCGACCACGGCATACGCGTCGTGCCGATTCCCGGTCCGTCGGCACCGCTGGCCGCGCTCACCGCGT
CCGGCCTGCCGTCCGACGCCTTCCTGTTCGCCGGATTTTTGCCGGTCAAGGTTGGCCAGCGGCTGACGCGGCTGGAGGCG
CTGAAGGCGGTACCGGCGACGCTGATCTTCTTCGAATCGCCGCGCCGGCTGGCCGAATCGCTCGGCGCCATGGTCGAGGC
GCTCGGTGGCGAGCGCAAAGCCGCGATCGGCCGCGAATTGACCAAGACCTTCGAGGAGATGCGCACGGGCACGCTGCGGG
CGCTGGCCGACCACTATGCGGCGGCCGACACGCCGAAGGGCGAGATCGTCGTCTGCGTCGGCCCGGCCGAGGCCAAGGCG
GACGAGCCCGCCGATATCGACCGCCTGCTTTTGTCGCTCGCCGCCGAAATGCCGGCCTCCAAGGCGGCCTCGGAGGCCGC
GAAGATGACCGGCGGCCAGAAACAGGCGCTTTACCGGCGGCTGCTGGAGCTCAAGGACACCTCAGGAGAAGGCGACGGTG
GCTGA

Upstream 100 bases:

>100_bases
TGCAAGCCTGCGCCAGCCATGCCAAACAAGATCTGGCAGGCTAAACAGGGGCTGAACGGAGACGGCATCAGTGACCGATG
AGACGGGCAGACGCAGCTAT

Downstream 100 bases:

>100_bases
GCGCCCGAGCGCCAGCCGCCAGAAAGCCTATCGGCGCGGCCATCGCGGCGAGTGGCTGGCGGCCGCCGCGCTGATGCTGA
AGGGCTACCGCATCCTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MVGQTEIPARPLEPALYLVATPIGNLADITLRALETLAAADIVACEDTRVSRVLLDRYGIRRRTTAYHEHNAGEAGPKLI
AALQGGQSVALISDAGTPLVSDPGYRLVGEAIDHGIRVVPIPGPSAPLAALTASGLPSDAFLFAGFLPVKVGQRLTRLEA
LKAVPATLIFFESPRRLAESLGAMVEALGGERKAAIGRELTKTFEEMRTGTLRALADHYAAADTPKGEIVVCVGPAEAKA
DEPADIDRLLLSLAAEMPASKAASEAAKMTGGQKQALYRRLLELKDTSGEGDGG

Sequences:

>Translated_294_residues
MVGQTEIPARPLEPALYLVATPIGNLADITLRALETLAAADIVACEDTRVSRVLLDRYGIRRRTTAYHEHNAGEAGPKLI
AALQGGQSVALISDAGTPLVSDPGYRLVGEAIDHGIRVVPIPGPSAPLAALTASGLPSDAFLFAGFLPVKVGQRLTRLEA
LKAVPATLIFFESPRRLAESLGAMVEALGGERKAAIGRELTKTFEEMRTGTLRALADHYAAADTPKGEIVVCVGPAEAKA
DEPADIDRLLLSLAAEMPASKAASEAAKMTGGQKQALYRRLLELKDTSGEGDGG
>Mature_294_residues
MVGQTEIPARPLEPALYLVATPIGNLADITLRALETLAAADIVACEDTRVSRVLLDRYGIRRRTTAYHEHNAGEAGPKLI
AALQGGQSVALISDAGTPLVSDPGYRLVGEAIDHGIRVVPIPGPSAPLAALTASGLPSDAFLFAGFLPVKVGQRLTRLEA
LKAVPATLIFFESPRRLAESLGAMVEALGGERKAAIGRELTKTFEEMRTGTLRALADHYAAADTPKGEIVVCVGPAEAKA
DEPADIDRLLLSLAAEMPASKAASEAAKMTGGQKQALYRRLLELKDTSGEGDGG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family

Homologues:

Organism=Escherichia coli, GI1789535, Length=272, Percent_Identity=50, Blast_Score=231, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMI_RHILO (Q98DM9)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105455.1
- ProteinModelPortal:   Q98DM9
- SMR:   Q98DM9
- GeneID:   1228116
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr4632
- NMPDR:   fig|266835.1.peg.3559
- HOGENOM:   HBG529058
- OMA:   ASDRFCF
- ProtClustDB:   CLSK506171
- GO:   GO:0005737
- HAMAP:   MF_01877
- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063
- Gene3D:   G3DSA:3.40.1010.10
- Gene3D:   G3DSA:3.30.950.10
- TIGRFAMs:   TIGR00096

Pfam domain/function: PF00590 TP_methylase; SSF53790 Cor/por_Metransf

EC number: NA

Molecular weight: Translated: 30808; Mature: 30808

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS01296 RSMI

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGQTEIPARPLEPALYLVATPIGNLADITLRALETLAAADIVACEDTRVSRVLLDRYGI
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCC
RRRTTAYHEHNAGEAGPKLIAALQGGQSVALISDAGTPLVSDPGYRLVGEAIDHGIRVVP
HHHHHHHHCCCCCCCCHHHHHEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEE
IPGPSAPLAALTASGLPSDAFLFAGFLPVKVGQRLTRLEALKAVPATLIFFESPRRLAES
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHH
LGAMVEALGGERKAAIGRELTKTFEEMRTGTLRALADHYAAADTPKGEIVVCVGPAEAKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
DEPADIDRLLLSLAAEMPASKAASEAAKMTGGQKQALYRRLLELKDTSGEGDGG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVGQTEIPARPLEPALYLVATPIGNLADITLRALETLAAADIVACEDTRVSRVLLDRYGI
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCC
RRRTTAYHEHNAGEAGPKLIAALQGGQSVALISDAGTPLVSDPGYRLVGEAIDHGIRVVP
HHHHHHHHCCCCCCCCHHHHHEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEE
IPGPSAPLAALTASGLPSDAFLFAGFLPVKVGQRLTRLEALKAVPATLIFFESPRRLAES
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHH
LGAMVEALGGERKAAIGRELTKTFEEMRTGTLRALADHYAAADTPKGEIVVCVGPAEAKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
DEPADIDRLLLSLAAEMPASKAASEAAKMTGGQKQALYRRLLELKDTSGEGDGG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968