| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473855
Identifier: 13473855
GI number: 13473855
Start: 3643951
End: 3644775
Strand: Reverse
Name: 13473855
Synonym: mll4589
Alternate gene names: NA
Gene position: 3644775-3643951 (Counterclockwise)
Preceding gene: 13473856
Following gene: 13473852
Centisome position: 51.8
GC content: 63.64
Gene sequence:
>825_bases ATGACCGAGCCCGACACGCTTCTGGATCGACTTGGCCACTGGCTTGCCGGCCGGCTGCAGGAAGAATCCTCCGGCTATGA GCCCTATACCCCGTCCGACGCCGAGACGCTGCGCCGCACGCTGGAGCCAGGCGACATCCTGCTGATCGAGGGCAACCAAA AGATTTCGGCGGCGATCAAATACCTCACACAGTCGACCTGGTCGCATGCGGCCTTCTATGTCGGCGACGCGCTGGCCGAA CCGGAGGACGGAACCGAGAGGCGGCGGCTGATCGAGGTGACGCTCGCCGAAGGCTGCGTGGCGGTACCCTTGTCGCGCTA TCGCACCTACAACACCCGCATCTGCCGGGCGAGCGGGCTGACACCGGAGGACCGCGATCACGTCGTCGCCTTCATGATCG GCAAGCTTGGCCTGAAATACGACCTCAAGAACATTTTCGACATGTTGCGCTATTTCCTGCCGACGCCGCCGGTGCCGGTG CGCTGGCGCCGCCGGATGCTCGCCTTCGGCTCCGGTGACCCGACGCGGGCCATCTGCTCCTCGCTCATCGCCGAGGCCTA TGGCCAGATCCACTACCCGATCCTGCCCGAGATCACCCATGCCCCCGGCCGTGCTTCGGCGCAGTCGACTTATATGCGCA AGGAAATCCTGCACATTCGCCACCACTCGCTCTACACGCCGCGCGACTTCGACCTGTCGCCGTTTTTCCGCATCGTCAAG CCGACGCTGGAATATGGTTTCGACTACCGGCAGATGGTCTGGGACGACAAGGCAAGCACAGACGCCGAAGCCGCAAAGGC TGGAGCTATCGCCTCAGACACGTGA
Upstream 100 bases:
>100_bases CTGGCCAGCCCGGCGCACGACGAGACGGGCGCTGCCGCCGGCTGACGAAGCGCCGGCGCGCTGGCACTTCCCCGCCGGCC CGTGCTAGTCACACTCCATC
Downstream 100 bases:
>100_bases TGGCTTCGGCCTGGGTCAGGACATGCCCCTATGGCGCGGCCTATGCGGCCGAGGTGCAGGGGTTTCACATGGCGGCCCGC ATCATGCCGAAACCGCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTEPDTLLDRLGHWLAGRLQEESSGYEPYTPSDAETLRRTLEPGDILLIEGNQKISAAIKYLTQSTWSHAAFYVGDALAE PEDGTERRRLIEVTLAEGCVAVPLSRYRTYNTRICRASGLTPEDRDHVVAFMIGKLGLKYDLKNIFDMLRYFLPTPPVPV RWRRRMLAFGSGDPTRAICSSLIAEAYGQIHYPILPEITHAPGRASAQSTYMRKEILHIRHHSLYTPRDFDLSPFFRIVK PTLEYGFDYRQMVWDDKASTDAEAAKAGAIASDT
Sequences:
>Translated_274_residues MTEPDTLLDRLGHWLAGRLQEESSGYEPYTPSDAETLRRTLEPGDILLIEGNQKISAAIKYLTQSTWSHAAFYVGDALAE PEDGTERRRLIEVTLAEGCVAVPLSRYRTYNTRICRASGLTPEDRDHVVAFMIGKLGLKYDLKNIFDMLRYFLPTPPVPV RWRRRMLAFGSGDPTRAICSSLIAEAYGQIHYPILPEITHAPGRASAQSTYMRKEILHIRHHSLYTPRDFDLSPFFRIVK PTLEYGFDYRQMVWDDKASTDAEAAKAGAIASDT >Mature_273_residues TEPDTLLDRLGHWLAGRLQEESSGYEPYTPSDAETLRRTLEPGDILLIEGNQKISAAIKYLTQSTWSHAAFYVGDALAEP EDGTERRRLIEVTLAEGCVAVPLSRYRTYNTRICRASGLTPEDRDHVVAFMIGKLGLKYDLKNIFDMLRYFLPTPPVPVR WRRRMLAFGSGDPTRAICSSLIAEAYGQIHYPILPEITHAPGRASAQSTYMRKEILHIRHHSLYTPRDFDLSPFFRIVKP TLEYGFDYRQMVWDDKASTDAEAAKAGAIASDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31014; Mature: 30882
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPDTLLDRLGHWLAGRLQEESSGYEPYTPSDAETLRRTLEPGDILLIEGNQKISAAIK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHH YLTQSTWSHAAFYVGDALAEPEDGTERRRLIEVTLAEGCVAVPLSRYRTYNTRICRASGL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCC TPEDRDHVVAFMIGKLGLKYDLKNIFDMLRYFLPTPPVPVRWRRRMLAFGSGDPTRAICS CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHH SLIAEAYGQIHYPILPEITHAPGRASAQSTYMRKEILHIRHHSLYTPRDFDLSPFFRIVK HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH PTLEYGFDYRQMVWDDKASTDAEAAKAGAIASDT HHHHHCCCHHHHHHCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure TEPDTLLDRLGHWLAGRLQEESSGYEPYTPSDAETLRRTLEPGDILLIEGNQKISAAIK CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHH YLTQSTWSHAAFYVGDALAEPEDGTERRRLIEVTLAEGCVAVPLSRYRTYNTRICRASGL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCC TPEDRDHVVAFMIGKLGLKYDLKNIFDMLRYFLPTPPVPVRWRRRMLAFGSGDPTRAICS CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHH SLIAEAYGQIHYPILPEITHAPGRASAQSTYMRKEILHIRHHSLYTPRDFDLSPFFRIVK HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH PTLEYGFDYRQMVWDDKASTDAEAAKAGAIASDT HHHHHCCCHHHHHHCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA