| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473494
Identifier: 13473494
GI number: 13473494
Start: 3292314
End: 3292940
Strand: Direct
Name: 13473494
Synonym: mlr4111
Alternate gene names: NA
Gene position: 3292314-3292940 (Clockwise)
Preceding gene: 13473493
Following gene: 13473496
Centisome position: 46.79
GC content: 65.23
Gene sequence:
>627_bases ATGTCCGGCACTCTGCGCATCCACTGGGCGATCACGCCCGAAATCGCACCTCAACCGCTGATCAACTGCAATCGCTGCGG CGGCGTGAAGGCCTATCGCTGCAGCGGAAAATTCCGCGTCAACGCCAACGGCAAGCGCATCGACGTGTGGTTGATCTATC GCTGCGTCGACTGCGACAATTCCTGGAATTTCGGCATTTTCGAACGCTGCAACCGCCGCGACATCGAACCGGTCCTGCTG CAGGCGCTCGAAAGCAACGACGCGGGACTGGCGCGGCGCCATGCCTTCGACATCGCCACCCTGCGCAACCAGGTGGGGCG TGTCGAGGAGTTTCCCGATGTCGCCGTGCACAAGCGGCTGCTGGGCGGCGCCAGCGAAAGCGCGGCGACCCTGGAGCTCC AGCTCGGGCTGGAAATGCCGACATCGCTCCGGCTTGACCGTCTGCTCGCCAGCGAACTCGGCATCTCGCGTTCGCGGCTC CAGACGCTGGCGGAACGGCGCCTCCTAGTCGTGGATCCGGACGGCGCCAAAGCCTTGCGCAAGCCGGCCCGCCAGGGAAT GACGATCCGGATCGACCTGGCCGGCGAGCCGGATCACGAAGCGATCATCTGTGCTGCCGGCGGGTAA
Upstream 100 bases:
>100_bases TGACTTCAAAAATCTCCGCAGCCTACCGCCACGCCGCGCCCGCATGGGCATCTCGATCGTGCCGACCTGATGAACTTCCC GACGGGAAGGGCTTATCGGC
Downstream 100 bases:
>100_bases ACGAGAGAGGGGCGGAGCACTTGGTGCTCCGCCCCTCTCGGAAACCGTCGGAAGAAAAAACTATGCCGCGCCGACCACCT TGGACGACTTCTCGAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSGTLRIHWAITPEIAPQPLINCNRCGGVKAYRCSGKFRVNANGKRIDVWLIYRCVDCDNSWNFGIFERCNRRDIEPVLL QALESNDAGLARRHAFDIATLRNQVGRVEEFPDVAVHKRLLGGASESAATLELQLGLEMPTSLRLDRLLASELGISRSRL QTLAERRLLVVDPDGAKALRKPARQGMTIRIDLAGEPDHEAIICAAGG
Sequences:
>Translated_208_residues MSGTLRIHWAITPEIAPQPLINCNRCGGVKAYRCSGKFRVNANGKRIDVWLIYRCVDCDNSWNFGIFERCNRRDIEPVLL QALESNDAGLARRHAFDIATLRNQVGRVEEFPDVAVHKRLLGGASESAATLELQLGLEMPTSLRLDRLLASELGISRSRL QTLAERRLLVVDPDGAKALRKPARQGMTIRIDLAGEPDHEAIICAAGG >Mature_207_residues SGTLRIHWAITPEIAPQPLINCNRCGGVKAYRCSGKFRVNANGKRIDVWLIYRCVDCDNSWNFGIFERCNRRDIEPVLLQ ALESNDAGLARRHAFDIATLRNQVGRVEEFPDVAVHKRLLGGASESAATLELQLGLEMPTSLRLDRLLASELGISRSRLQ TLAERRLLVVDPDGAKALRKPARQGMTIRIDLAGEPDHEAIICAAGG
Specific function: Unknown
COG id: COG4332
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23010; Mature: 22879
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTLRIHWAITPEIAPQPLINCNRCGGVKAYRCSGKFRVNANGKRIDVWLIYRCVDCDN CCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEEEEEEECCC SWNFGIFERCNRRDIEPVLLQALESNDAGLARRHAFDIATLRNQVGRVEEFPDVAVHKRL CCCCHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHH LGGASESAATLELQLGLEMPTSLRLDRLLASELGISRSRLQTLAERRLLVVDPDGAKALR HCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCHHHHH KPARQGMTIRIDLAGEPDHEAIICAAGG HHHHCCCEEEEEECCCCCCCEEEEECCC >Mature Secondary Structure SGTLRIHWAITPEIAPQPLINCNRCGGVKAYRCSGKFRVNANGKRIDVWLIYRCVDCDN CCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEEEEEEECCC SWNFGIFERCNRRDIEPVLLQALESNDAGLARRHAFDIATLRNQVGRVEEFPDVAVHKRL CCCCHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHH LGGASESAATLELQLGLEMPTSLRLDRLLASELGISRSRLQTLAERRLLVVDPDGAKALR HCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCHHHHH KPARQGMTIRIDLAGEPDHEAIICAAGG HHHHCCCEEEEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA