| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473479
Identifier: 13473479
GI number: 13473479
Start: 3272736
End: 3274169
Strand: Reverse
Name: 13473479
Synonym: mll4092
Alternate gene names: NA
Gene position: 3274169-3272736 (Counterclockwise)
Preceding gene: 13473480
Following gene: 13473478
Centisome position: 46.53
GC content: 61.44
Gene sequence:
>1434_bases ATGCGAAATTACAGGGGTCTTGTTCACGCGGTCGGCGGGTTCGCCAGACACAGCGGTGGAAATTTCGCAATCCTGTTCGG CTTTGCTGCCTCGGTCTTGGCGCTGGCCGCCGGCTTCTCGGTCGACATCTCGCAGCTCTACAACGCCAAATCGGGCCTGC AAGGCGTGGTCGACGCCGCGGTGACATCGACGGCGCGCGACCTGACGACCGGGGTCATCAAGGAAGCCGACGCCAGCAAG GCGGTGCAGAACTTTCTGGTGGCCAACAGCATGGCGGGCATTCTGCAGCCCGACCAGATCGTGCTCGACAGACTGGTCGT CGACAGGACCGCCAACACGGTGCAGGCGGACGCCCATGTCGATGTCGCCCTGTTCTTCCCGGTTTTCGGCATGGGCAATA CGCAACGCGTCACCGCGTCGACGACATCGCTTTATTCGGACAAGACCATCGAAGTGGCGATGATGCTCGATGTGACCGGA TCGATGGCCGCCAACTGGTGGGCAAAGACCGACAAGATCGGCGACTTGCAGGCCGCCGCTTCAACGGCCGTCGAAAATCT GCTGGACAACAACATCGACCCGAACAATCCGCGCGTGCGCGTGGCGATAGTTCCCTATGCCGAAGCGGTGAATACGGGCG GCCTCGCCGACAGCGTTTTCGTCGAGCAGGCAGGGGGCTCGAACCTGCCACCACCAGTGCCATCGGCGGGTGCACCGATC CCGGTTGGCTCATCCGTGACCCTGCGGCCCGACAAATGCGCCACCGAGCGCAAGGACAAGGACGGCTATGCCGATTACTC GTCCGACGGGCCGTCCGAGTTGCGCAGGAACAATCAGAACCAGGAGTATCTCGCCAAGGTCAACCGCGATGATCGCATGG GTACCTGCCCGAAGCCGGAGCTTATTCCGCTGACAGCCGACAAACAGAAATTGCTCGACACGATTGCTGATTTCAAGGCG GCAGGCGTGACCGCCGGCGGCATCGCTGTGCAGTGGGGCTATTACATGCTCTCGCCGTCCTGGCGCTCGACCATTGTCAA CGCCCGGCTGGGCAGTGGTCCTGCCAATTTCGACAACAGAAAAGTCGGCAAGGTCGCGATCCTGATGACGGACGGCCAGT TCAACACGGCGTTCGCCGCCGGGCGCGGCGCGCCCAGATCGCAAAATGCCGGCCAGATGTCGCGAAGCAATGCCGAAAGC ATTTGCGACAACATGAAGCGCGACGGCATCGAGATCTTCACCATAGGCTTCGACCTCGACGATCCGTCGATGACATCGAC CGAGCGGGATCAGGCAAAGAGCGTGCTCCAGGACTGCTCCACGGCCGATACGTCCACCCTGAAGCATTATTACGAGGCGG CTACGGGTCCCGAACTGGACGAAGCATTCAATGCCATCGTGCAGAACATCGAGCGGCTGACGATCGCCAAGTGA
Upstream 100 bases:
>100_bases GTTCGCGGCCCGGTTCCGGCGCTCGACGAGCGGCTTCCGGCTGGAATCCTGCATTGCCCTCATTGCGGCGACGAGGCCGA GGCAAGCGGAGGCTGTTGGA
Downstream 100 bases:
>100_bases ACCGCCGTGGCCTCTGGCGACATTGGGCCAACGGAAAAGGCCGCCGCTTCTTTCGAAGCCGGCGGCCTTCCGTGTTTCCG TCCATGGCGCGGCCTGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAAVTSTARDLTTGVIKEADASK AVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHVDVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTG SMAANWWAKTDKIGDLQAAASTAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPELIPLTADKQKLLDTIADFKA AGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNRKVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAES ICDNMKRDGIEIFTIGFDLDDPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK
Sequences:
>Translated_477_residues MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAAVTSTARDLTTGVIKEADASK AVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHVDVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTG SMAANWWAKTDKIGDLQAAASTAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPELIPLTADKQKLLDTIADFKA AGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNRKVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAES ICDNMKRDGIEIFTIGFDLDDPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK >Mature_477_residues MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAAVTSTARDLTTGVIKEADASK AVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHVDVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTG SMAANWWAKTDKIGDLQAAASTAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPELIPLTADKQKLLDTIADFKA AGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNRKVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAES ICDNMKRDGIEIFTIGFDLDDPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50775; Mature: 50775
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAA CCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHH VTSTARDLTTGVIKEADASKAVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCE DVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTGSMAANWWAKTDKIGDLQAAA EEEEEEHHHCCCCCCEEEECHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHH STAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI HHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPE CCCCCEEECCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC LIPLTADKQKLLDTIADFKAAGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNR EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCCHHHHEEECCCCCCCCCCCCC KVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAESICDNMKRDGIEIFTIGFDLD CCCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCCEEEEEEEECCC DPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAA CCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHH VTSTARDLTTGVIKEADASKAVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCE DVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTGSMAANWWAKTDKIGDLQAAA EEEEEEHHHCCCCCCEEEECHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHH STAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI HHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPE CCCCCEEECCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC LIPLTADKQKLLDTIADFKAAGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNR EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCCHHHHEEECCCCCCCCCCCCC KVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAESICDNMKRDGIEIFTIGFDLD CCCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCCEEEEEEEECCC DPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA