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The map label for this gene is tal

Identifier: 13473464

GI number: 13473464

Start: 3253946

End: 3254602

Strand: Direct

Name: tal

Synonym: mlr4072

Alternate gene names: 13473464

Gene position: 3253946-3254602 (Clockwise)

Preceding gene: 13473454

Following gene: 13473468

Centisome position: 46.25

GC content: 62.4

Gene sequence:

>657_bases
ATGAAATTTTTTGTCGATACCGCCGACATCAAGGATATCCGTGAACTCAACGATCTGGGGCTGCTCGACGGCGTCACCAC
CAATCCGTCGCTGATTCTCAAATCCGGCGGCAAGATCGCCGACGTCACCAAGCAGATCTGCGACATCGTCCAGGGTCCGG
TTTCGGCCGAAGTCGTGGCGACCGAGTACAAGGACATGATGGCGGAGGCCGAGGTGCTGGCCAAGATCGCGCCCAATGTC
TGCATCAAGGTGCCGCTGACGCTGGACGGCCTGAAGGCCTGCAAGACGATCCGCACCCAGATGAACCGCATGGTCAACGT
CACGCTGTGCTTCTCGGCCAACCAGGCGCTGCTCGCCGCCAAGGCCGGCGCCTCGTTCATCTCGCCCTTCGTCGGCCGCA
TCGACGACACCGGCTCGGACGGCATGGAGCTGATCCAGGAGATCCGCCAGATCTACGACAATTACGATTACCAGACCGAG
ATTCTGACCGCTTCGGTGCGCACGGTGAACCACGTCAAGCAGGCGGCCCTGATCGGCGCCGACGTCATCACCGCACCGCC
GGCGACGCTGAAGGCGCTGGTCAACCATCCGCTGACCGACAAGGGTCTCGCCGCCTTCCTCGCCGACTGGGCCAAGACCG
GCCAGAAGATCGGCTGA

Upstream 100 bases:

>100_bases
CTTCGATCATGAGGCGTGACCTTGCCCTGACTTTGGTCTAGATCAAAGGCCGACCCCGAATGTGCATGGCATGCACATAA
GAATCTTCAGGAGACCCGCC

Downstream 100 bases:

>100_bases
GATCGTACCGTTTCAATGAGAAAAGGCCGGGCAACCGGCCTTTTTTATTATCCGTCGGAAGATGTCCGATTGTCGAAAGG
GCCGCCGATCATTCCGTGCC

Product: putative translaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKFFVDTADIKDIRELNDLGLLDGVTTNPSLILKSGGKIADVTKQICDIVQGPVSAEVVATEYKDMMAEAEVLAKIAPNV
CIKVPLTLDGLKACKTIRTQMNRMVNVTLCFSANQALLAAKAGASFISPFVGRIDDTGSDGMELIQEIRQIYDNYDYQTE
ILTASVRTVNHVKQAALIGADVITAPPATLKALVNHPLTDKGLAAFLADWAKTGQKIG

Sequences:

>Translated_218_residues
MKFFVDTADIKDIRELNDLGLLDGVTTNPSLILKSGGKIADVTKQICDIVQGPVSAEVVATEYKDMMAEAEVLAKIAPNV
CIKVPLTLDGLKACKTIRTQMNRMVNVTLCFSANQALLAAKAGASFISPFVGRIDDTGSDGMELIQEIRQIYDNYDYQTE
ILTASVRTVNHVKQAALIGADVITAPPATLKALVNHPLTDKGLAAFLADWAKTGQKIG
>Mature_218_residues
MKFFVDTADIKDIRELNDLGLLDGVTTNPSLILKSGGKIADVTKQICDIVQGPVSAEVVATEYKDMMAEAEVLAKIAPNV
CIKVPLTLDGLKACKTIRTQMNRMVNVTLCFSANQALLAAKAGASFISPFVGRIDDTGSDGMELIQEIRQIYDNYDYQTE
ILTASVRTVNHVKQAALIGADVITAPPATLKALVNHPLTDKGLAAFLADWAKTGQKIG

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily

Homologues:

Organism=Homo sapiens, GI5803187, Length=249, Percent_Identity=29.718875502008, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI87081788, Length=213, Percent_Identity=32.8638497652582, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1790382, Length=212, Percent_Identity=30.188679245283, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786189, Length=173, Percent_Identity=32.9479768786127, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25153750, Length=175, Percent_Identity=33.1428571428571, Blast_Score=80, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6321480, Length=181, Percent_Identity=32.0441988950276, Blast_Score=72, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6323386, Length=224, Percent_Identity=32.1428571428571, Blast_Score=62, Evalue=5e-11,
Organism=Drosophila melanogaster, GI45549185, Length=244, Percent_Identity=29.9180327868852, Blast_Score=80, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TAL_RHILO (Q98EV0)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105031.1
- ProteinModelPortal:   Q98EV0
- SMR:   Q98EV0
- GeneID:   1227692
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr4072
- NMPDR:   fig|266835.1.peg.3135
- HOGENOM:   HBG533000
- OMA:   IHKNIVI
- ProtClustDB:   PRK01362
- BRENDA:   2.2.1.2
- GO:   GO:0005737
- HAMAP:   MF_00494
- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10683
- TIGRFAMs:   TIGR00875

Pfam domain/function: PF00923 Transaldolase

EC number: =2.2.1.2

Molecular weight: Translated: 23408; Mature: 23408

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2

Important sites: ACT_SITE 83-83

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFVDTADIKDIRELNDLGLLDGVTTNPSLILKSGGKIADVTKQICDIVQGPVSAEVVA
CCEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHH
TEYKDMMAEAEVLAKIAPNVCIKVPLTLDGLKACKTIRTQMNRMVNVTLCFSANQALLAA
HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHH
KAGASFISPFVGRIDDTGSDGMELIQEIRQIYDNYDYQTEILTASVRTVNHVKQAALIGA
HHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
DVITAPPATLKALVNHPLTDKGLAAFLADWAKTGQKIG
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFFVDTADIKDIRELNDLGLLDGVTTNPSLILKSGGKIADVTKQICDIVQGPVSAEVVA
CCEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHH
TEYKDMMAEAEVLAKIAPNVCIKVPLTLDGLKACKTIRTQMNRMVNVTLCFSANQALLAA
HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHH
KAGASFISPFVGRIDDTGSDGMELIQEIRQIYDNYDYQTEILTASVRTVNHVKQAALIGA
HHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
DVITAPPATLKALVNHPLTDKGLAAFLADWAKTGQKIG
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968