| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473403
Identifier: 13473403
GI number: 13473403
Start: 3189738
End: 3190316
Strand: Reverse
Name: 13473403
Synonym: mll3989
Alternate gene names: NA
Gene position: 3190316-3189738 (Counterclockwise)
Preceding gene: 13473406
Following gene: 13473401
Centisome position: 45.34
GC content: 61.31
Gene sequence:
>579_bases GTGATGCGTATCGGCTTTGCGGTTGCGGCTGCCGTATTTCTGTCCTGCACCTCGGCGGCCAATGCCGCCGACAAGACCGT TCACGACAAGGATAACGGATTTTCCCTGACCTTTCCGGAAGGGTGGACCATCGAGGAGCCTTCCGGCAAGACGATGCGGC TGAAGATAAAGTCCGGCGATCAGGGCCTCACCTGCCGGGTATCGATCGGTCTCTATGATCCGCAGGCGTCCGATTCCCCC GCCGATCCCAAGGCATTCCTCGAGACGGGCTGGTCGCCGCAGGCCTGGCAAGAGATGGTGGGAGCCGCCTTTACCTCGTC GGTCTTCAGCAACGAAAAGTTGATCCGCTTTCCCGACGGCTATCCGGCACGAATGGCCGATATGGATTTCCAGGTCGGCG ACGGCAGCGCCAGCTTCCCCGGTCACGCCAAGGTCGTGCTTTCGCTACGCGGCACACACTTCGGTCTGGTGACCTGCGGG CTCACGGGCGACAGCGTCGAGCAAATGAAGCGGAAGTGGGTGCCATTGGCCGATGAGGCTGAACGGGTGGCGAGCTCTTT TGTTCTCGATGGACCCTGA
Upstream 100 bases:
>100_bases GTGGCAAGGAAAAGGCGGCGGCCATCACCTGACCGTGTTATGACCGCGGCGGTACAACCTGCCGGGCGCATGGTCCCCGT CTGGCATTTCGCGAGCATCA
Downstream 100 bases:
>100_bases GCGCCTCTAGAGCGTTTCACCGTTTCATGGAAACGGCGAACCGCTCTAACTCTTTGTTTTGACGCAATTCCCAAGGGAAA GCGCAACGCGCTTTTCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MMRIGFAVAAAVFLSCTSAANAADKTVHDKDNGFSLTFPEGWTIEEPSGKTMRLKIKSGDQGLTCRVSIGLYDPQASDSP ADPKAFLETGWSPQAWQEMVGAAFTSSVFSNEKLIRFPDGYPARMADMDFQVGDGSASFPGHAKVVLSLRGTHFGLVTCG LTGDSVEQMKRKWVPLADEAERVASSFVLDGP
Sequences:
>Translated_192_residues MMRIGFAVAAAVFLSCTSAANAADKTVHDKDNGFSLTFPEGWTIEEPSGKTMRLKIKSGDQGLTCRVSIGLYDPQASDSP ADPKAFLETGWSPQAWQEMVGAAFTSSVFSNEKLIRFPDGYPARMADMDFQVGDGSASFPGHAKVVLSLRGTHFGLVTCG LTGDSVEQMKRKWVPLADEAERVASSFVLDGP >Mature_192_residues MMRIGFAVAAAVFLSCTSAANAADKTVHDKDNGFSLTFPEGWTIEEPSGKTMRLKIKSGDQGLTCRVSIGLYDPQASDSP ADPKAFLETGWSPQAWQEMVGAAFTSSVFSNEKLIRFPDGYPARMADMDFQVGDGSASFPGHAKVVLSLRGTHFGLVTCG LTGDSVEQMKRKWVPLADEAERVASSFVLDGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20602; Mature: 20602
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRIGFAVAAAVFLSCTSAANAADKTVHDKDNGFSLTFPEGWTIEEPSGKTMRLKIKSGD CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEEEEECCC QGLTCRVSIGLYDPQASDSPADPKAFLETGWSPQAWQEMVGAAFTSSVFSNEKLIRFPDG CCEEEEEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC YPARMADMDFQVGDGSASFPGHAKVVLSLRGTHFGLVTCGLTGDSVEQMKRKWVPLADEA CCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCCCHHH ERVASSFVLDGP HHHHHHEECCCC >Mature Secondary Structure MMRIGFAVAAAVFLSCTSAANAADKTVHDKDNGFSLTFPEGWTIEEPSGKTMRLKIKSGD CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEEEEECCC QGLTCRVSIGLYDPQASDSPADPKAFLETGWSPQAWQEMVGAAFTSSVFSNEKLIRFPDG CCEEEEEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC YPARMADMDFQVGDGSASFPGHAKVVLSLRGTHFGLVTCGLTGDSVEQMKRKWVPLADEA CCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCCCHHH ERVASSFVLDGP HHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA