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The map label for this gene is ygfA [C]

Identifier: 13473376

GI number: 13473376

Start: 3163615

End: 3164202

Strand: Reverse

Name: ygfA [C]

Synonym: mll3954

Alternate gene names: 13473376

Gene position: 3164202-3163615 (Counterclockwise)

Preceding gene: 13473383

Following gene: 13473375

Centisome position: 44.97

GC content: 63.78

Gene sequence:

>588_bases
ATGACATCTCTCAAAGACCTGAAAAAACAGCTGCGGCTCCAGGCGCTTGGACGCCGCGACGCGCTCGATGAGTTCTGGCG
GGTGGAGGTGGCGCTGGAAATGGCCGAGACAGCGCGCGATCATCTGGCGATCGAGCCTGGCCAGATCGTCTCCGGCTTCT
GGCCGATGCGTTCGGAAGTCGACGTCAGGCCCTTGATGTTCGCCTTGCGCGAACAGGGCGCCAGGCTTTGCCTGCCCGCC
ATTCTCGACAAGACCACGATCGTCTTTCGCGAGCTGGTGCGCGGCGCGCCGATGGTGGATATGGGCTTCGGCACGGTCGG
GCCCCATGAAGAGGCCGAGGTGCTCGATCCCGAGGTGATGCTGGTGCCGCTCGCCGCCTTCGACGCGCGCGGCCACCGCA
TCGGCTATGGCGCCGGCTATTACGACCGCGCAATCGCGAAGCTTGTCGACAAGGGGCATACACCCCGGCTGATCGGCATC
GCCTTTGACTGCCAGGAGGTGGCGCAGGTTCCGGACGAGAACCATGACGTCATCATCCCGGAAATACTCACCGAGAGCGG
GTTGCGCCGCTTCACGCCAAAATTGTAG

Upstream 100 bases:

>100_bases
TCACTTCTTGCCCCTGTATCCACGCATTTCGGTGGATGATGCGGTGGAAAACGTCGCTCCCAAAACGCCATCCAGATCCG
GCCTTTTCTATCGTCCGCGC

Downstream 100 bases:

>100_bases
ATAATGGAGGCATGATCTTTTCGCGGATGTCATGCAGCTTTTGCTTCGCTGACTTTCGGTGCGGGATCATATGAGACTTC
TCTTCCTCGGTGACATGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTSLKDLKKQLRLQALGRRDALDEFWRVEVALEMAETARDHLAIEPGQIVSGFWPMRSEVDVRPLMFALREQGARLCLPA
ILDKTTIVFRELVRGAPMVDMGFGTVGPHEEAEVLDPEVMLVPLAAFDARGHRIGYGAGYYDRAIAKLVDKGHTPRLIGI
AFDCQEVAQVPDENHDVIIPEILTESGLRRFTPKL

Sequences:

>Translated_195_residues
MTSLKDLKKQLRLQALGRRDALDEFWRVEVALEMAETARDHLAIEPGQIVSGFWPMRSEVDVRPLMFALREQGARLCLPA
ILDKTTIVFRELVRGAPMVDMGFGTVGPHEEAEVLDPEVMLVPLAAFDARGHRIGYGAGYYDRAIAKLVDKGHTPRLIGI
AFDCQEVAQVPDENHDVIIPEILTESGLRRFTPKL
>Mature_194_residues
TSLKDLKKQLRLQALGRRDALDEFWRVEVALEMAETARDHLAIEPGQIVSGFWPMRSEVDVRPLMFALREQGARLCLPAI
LDKTTIVFRELVRGAPMVDMGFGTVGPHEEAEVLDPEVMLVPLAAFDARGHRIGYGAGYYDRAIAKLVDKGHTPRLIGIA
FDCQEVAQVPDENHDVIIPEILTESGLRRFTPKL

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=178, Percent_Identity=28.0898876404494, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21830; Mature: 21698

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLKDLKKQLRLQALGRRDALDEFWRVEVALEMAETARDHLAIEPGQIVSGFWPMRSEV
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCCC
DVRPLMFALREQGARLCLPAILDKTTIVFRELVRGAPMVDMGFGTVGPHEEAEVLDPEVM
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHCCCCEE
LVPLAAFDARGHRIGYGAGYYDRAIAKLVDKGHTPRLIGIAFDCQEVAQVPDENHDVIIP
EEEHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCEEEEEEECHHHHHHCCCCCCCEEHH
EILTESGLRRFTPKL
HHHHHCHHHHCCCCC
>Mature Secondary Structure 
TSLKDLKKQLRLQALGRRDALDEFWRVEVALEMAETARDHLAIEPGQIVSGFWPMRSEV
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCCC
DVRPLMFALREQGARLCLPAILDKTTIVFRELVRGAPMVDMGFGTVGPHEEAEVLDPEVM
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHCCCCEE
LVPLAAFDARGHRIGYGAGYYDRAIAKLVDKGHTPRLIGIAFDCQEVAQVPDENHDVIIP
EEEHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCEEEEEEECHHHHHHCCCCCCCEEHH
EILTESGLRRFTPKL
HHHHHCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]