| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473373
Identifier: 13473373
GI number: 13473373
Start: 3161387
End: 3161854
Strand: Direct
Name: 13473373
Synonym: mlr3950
Alternate gene names: NA
Gene position: 3161387-3161854 (Clockwise)
Preceding gene: 13473372
Following gene: 13473377
Centisome position: 44.93
GC content: 63.46
Gene sequence:
>468_bases ATGGAGATCCGCGAAACCCCGACAGCCGAAACCGGCATGCTGATCCGGCGGCCTGTCGCCGAAGTGTTCGAGGCCATCGT CGATCCGGCCATCACCACCAAATTCTGGTTCACCCACGGCAGCGATCGGCTGGATAGCGGCGAAGAGGTCCGCTGGGAGT GGCGCATGTACGGCGTCTCGACGACCGCCAAGGTCAGCGAGATCGTCAGGAATGAAAGGATCGTCATGCAATGGAGCGAT CCGCCGACAACGGTGGTCTGGACCTTCACCGAAATGCCCGGCGATGCAACCTTTCTCGAGGTCCGCAACTTCGGCTTCGC CAGCACGCCCGACGAGCAGGTCAAAGAAGCGATCGGCTCGACCGGTGGCTTCACGTTGGTGCTGGCCGGCGCCAAGGCCT GGCTGGAACAAGGCCTGACGCTAGGCCTTATCGGCGACCGCCACCCGAAGGGTGTGCCGGGGCGTTAG
Upstream 100 bases:
>100_bases TGAAGGCCTATGTCGAATACGGCATCAATCTGCGCGACGGCTATTACCGCAGTGAGATGAAGGGCGAGCCCGCCAACGAG ACCAATGTTTGAGCGTTCCC
Downstream 100 bases:
>100_bases ATGCCCCAGCATGCCGGTCTCAATGCCCGTCGTCGGGCTTCGCTTTCCTGCGCCGCCGCGCCAGCATGTTGAGCCCTTCG ACCAGGGCCGAGAAACCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MEIRETPTAETGMLIRRPVAEVFEAIVDPAITTKFWFTHGSDRLDSGEEVRWEWRMYGVSTTAKVSEIVRNERIVMQWSD PPTTVVWTFTEMPGDATFLEVRNFGFASTPDEQVKEAIGSTGGFTLVLAGAKAWLEQGLTLGLIGDRHPKGVPGR
Sequences:
>Translated_155_residues MEIRETPTAETGMLIRRPVAEVFEAIVDPAITTKFWFTHGSDRLDSGEEVRWEWRMYGVSTTAKVSEIVRNERIVMQWSD PPTTVVWTFTEMPGDATFLEVRNFGFASTPDEQVKEAIGSTGGFTLVLAGAKAWLEQGLTLGLIGDRHPKGVPGR >Mature_155_residues MEIRETPTAETGMLIRRPVAEVFEAIVDPAITTKFWFTHGSDRLDSGEEVRWEWRMYGVSTTAKVSEIVRNERIVMQWSD PPTTVVWTFTEMPGDATFLEVRNFGFASTPDEQVKEAIGSTGGFTLVLAGAKAWLEQGLTLGLIGDRHPKGVPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17272; Mature: 17272
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRETPTAETGMLIRRPVAEVFEAIVDPAITTKFWFTHGSDRLDSGEEVRWEWRMYGVS CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCC TTAKVSEIVRNERIVMQWSDPPTTVVWTFTEMPGDATFLEVRNFGFASTPDEQVKEAIGS CHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHCC TGGFTLVLAGAKAWLEQGLTLGLIGDRHPKGVPGR CCCEEEEEECHHHHHHCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MEIRETPTAETGMLIRRPVAEVFEAIVDPAITTKFWFTHGSDRLDSGEEVRWEWRMYGVS CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCC TTAKVSEIVRNERIVMQWSDPPTTVVWTFTEMPGDATFLEVRNFGFASTPDEQVKEAIGS CHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHCC TGGFTLVLAGAKAWLEQGLTLGLIGDRHPKGVPGR CCCEEEEEECHHHHHHCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA