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The map label for this gene is exbD [H]

Identifier: 13473332

GI number: 13473332

Start: 3127913

End: 3128347

Strand: Reverse

Name: exbD [H]

Synonym: mll3890

Alternate gene names: 13473332

Gene position: 3128347-3127913 (Counterclockwise)

Preceding gene: 13473333

Following gene: 13473331

Centisome position: 44.46

GC content: 60.69

Gene sequence:

>435_bases
ATGGCGGGACGCGGCGGGCGCGGCCACAGGCGGCGCGGCCGTCATCATGGGCTGATGTCGGAAATCAACGTCACGCCAAT
GGTCGACGTCATGCTGGTGCTGCTGATCATCTTCATGGTCGCGGCACCGATGCTGACGGTCGGCGTACCGATCGACCTGC
CCGACACGCAGGCCAAGGCGATGAATGCCGACACGCAGCCGATCACCGTCTCGATCAACGCCGCCGGCCAAATCTATCTC
CAGGAAACCGAGATCCCGATCGAGGAATTGGTGGCCAAGCTGCAGGCGATCTCGAAGACCGGTTATGAGGAGCGCATCTT
CATCCGTGGTGACAAGTCCACCGACTATGGCACGGCGATGAAGGTGATGGCCCGCATTTCAGCCGCCGGCTACAAGAATA
TCGGCCTGGTTTCGTTGCAGGAACAGGATCAATAG

Upstream 100 bases:

>100_bases
GAAGGGTTCTCCGACGAGTTCTCCGCCATACTCTCGCGCCAAATCGATGAAAAAGTCGCGCCGAAGGCCTGAGGAGTAGC
TGATGGGTATGTCCGTAGGC

Downstream 100 bases:

>100_bases
ACGCGAGATGAAAACCGGCCTCACCACATCGGTGATCTTGCACACGGCGGTGCTGGCCTTCGGCCTGTTCACCCTGTCGG
CGCCGGCCGCGCTCCCGTCC

Product: enterochelin uptake protein TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAGRGGRGHRRRGRHHGLMSEINVTPMVDVMLVLLIIFMVAAPMLTVGVPIDLPDTQAKAMNADTQPITVSINAAGQIYL
QETEIPIEELVAKLQAISKTGYEERIFIRGDKSTDYGTAMKVMARISAAGYKNIGLVSLQEQDQ

Sequences:

>Translated_144_residues
MAGRGGRGHRRRGRHHGLMSEINVTPMVDVMLVLLIIFMVAAPMLTVGVPIDLPDTQAKAMNADTQPITVSINAAGQIYL
QETEIPIEELVAKLQAISKTGYEERIFIRGDKSTDYGTAMKVMARISAAGYKNIGLVSLQEQDQ
>Mature_143_residues
AGRGGRGHRRRGRHHGLMSEINVTPMVDVMLVLLIIFMVAAPMLTVGVPIDLPDTQAKAMNADTQPITVSINAAGQIYLQ
ETEIPIEELVAKLQAISKTGYEERIFIRGDKSTDYGTAMKVMARISAAGYKNIGLVSLQEQDQ

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=122, Percent_Identity=42.6229508196721, Blast_Score=102, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400
- InterPro:   IPR014170 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15724; Mature: 15592

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRGGRGHRRRGRHHGLMSEINVTPMVDVMLVLLIIFMVAAPMLTVGVPIDLPDTQAKA
CCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
MNADTQPITVSINAAGQIYLQETEIPIEELVAKLQAISKTGYEERIFIRGDKSTDYGTAM
CCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
KVMARISAAGYKNIGLVSLQEQDQ
HHHHHHHHCCCCCCCEEEECCCCC
>Mature Secondary Structure 
AGRGGRGHRRRGRHHGLMSEINVTPMVDVMLVLLIIFMVAAPMLTVGVPIDLPDTQAKA
CCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
MNADTQPITVSINAAGQIYLQETEIPIEELVAKLQAISKTGYEERIFIRGDKSTDYGTAM
CCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
KVMARISAAGYKNIGLVSLQEQDQ
HHHHHHHHCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]