| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473282
Identifier: 13473282
GI number: 13473282
Start: 3068803
End: 3069759
Strand: Direct
Name: 13473282
Synonym: mlr3829
Alternate gene names: NA
Gene position: 3068803-3069759 (Clockwise)
Preceding gene: 13473280
Following gene: 13473289
Centisome position: 43.62
GC content: 65.31
Gene sequence:
>957_bases ATGACCAAGATCGCAATTCTCGGCGCCAATGGCCGGCTCGGCCGCGTGGTTGCCAAGGCCTTCATCGACGCCGGCTTCGA CGTCCGCACCGTCACCCGCACCGGCAAGGTGCCGGCAGAGCTCGATGGCGCCACGGCGGTTGCCGGCGATGCGCTGGATC GTCAATCGCTGATAAGTGCCACCGAGGGCGTCGACATCATCTTCAACGGCCTCAACCCGATCTACACCGACTGGGGCAAA TGCCTGCCGATGGCCGAGAACGTCATGGCCGCCTGCCATGCCAACAACGCGCTGCATCTGTTCCCCGGCACCGTCTACAA TTACGGCTCGCCGATGCCGGCGGTGATCACGGAAGACACGCCGTTCCATCCGACCACCGAAAAGGGCCGCATCCGCTGCG CCATGGAGGAGCTGTTCCGCCGCGAGGCCGATGCTGGCCGCGTCCGCACCATTCTTTTGCGCGCCGGCGACTTCTTCGGC GGCACCGGCAGCGGCTCCTGGTTCGACCTGGTCGTCGCCGCCAAGATGAGCAAGGGCGTCTACACCGCGCCCGGTCCGGT CGATCTGGTGCATGAATGGGCCTATCTGCCGGACTTCGCCGTGGGCTTCGTCGCGCTCGCCAGGAATCTCGACAGGCTCG GCTCCTATGAGGCGCTGAACTTTCCAGGCCATGCCGTCACCGATCTTGAGATCAAGGCCGCTGCCGAGAAGGCGCTTGGC CGGCCGCTCAAGATGACTTCGATGCCCTGGTGGGTGCTGCGCGCCGGCAGCCCGTTCGTGGCGATGTGGCGCGAGATCGT CTCGATGTCCTATCTGCGCTTCGAACCGCACCAACTGGCCTCGACGCGGCTGGAAGGCATCATCGGCGAAATCCCGCACA CGCCGCTCGATCAGGCCGTCGCCCAGGCCCTCGAAGACATCGGCATCGCCACTGTGAAGGGCATGAAAGCTGCCTGA
Upstream 100 bases:
>100_bases CAAAACTGCATCCATGGTCAATTTCAATTCATCGGTGAGGCAATCATATTCGCCCAGCAAACACCGATACAGACTGCAAC GACCAACCAGGAGAATTCAA
Downstream 100 bases:
>100_bases GTCAAGCCGGCGGGCCATGCCCGCCACGAACCGGAAAGGCGGCTCAGAGCCGCCCCATCAGCAGCAACACCAGGACCACC ACCAGCGCCACACCGACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; Epimerase; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerases; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTKIAILGANGRLGRVVAKAFIDAGFDVRTVTRTGKVPAELDGATAVAGDALDRQSLISATEGVDIIFNGLNPIYTDWGK CLPMAENVMAACHANNALHLFPGTVYNYGSPMPAVITEDTPFHPTTEKGRIRCAMEELFRREADAGRVRTILLRAGDFFG GTGSGSWFDLVVAAKMSKGVYTAPGPVDLVHEWAYLPDFAVGFVALARNLDRLGSYEALNFPGHAVTDLEIKAAAEKALG RPLKMTSMPWWVLRAGSPFVAMWREIVSMSYLRFEPHQLASTRLEGIIGEIPHTPLDQAVAQALEDIGIATVKGMKAA
Sequences:
>Translated_318_residues MTKIAILGANGRLGRVVAKAFIDAGFDVRTVTRTGKVPAELDGATAVAGDALDRQSLISATEGVDIIFNGLNPIYTDWGK CLPMAENVMAACHANNALHLFPGTVYNYGSPMPAVITEDTPFHPTTEKGRIRCAMEELFRREADAGRVRTILLRAGDFFG GTGSGSWFDLVVAAKMSKGVYTAPGPVDLVHEWAYLPDFAVGFVALARNLDRLGSYEALNFPGHAVTDLEIKAAAEKALG RPLKMTSMPWWVLRAGSPFVAMWREIVSMSYLRFEPHQLASTRLEGIIGEIPHTPLDQAVAQALEDIGIATVKGMKAA >Mature_317_residues TKIAILGANGRLGRVVAKAFIDAGFDVRTVTRTGKVPAELDGATAVAGDALDRQSLISATEGVDIIFNGLNPIYTDWGKC LPMAENVMAACHANNALHLFPGTVYNYGSPMPAVITEDTPFHPTTEKGRIRCAMEELFRREADAGRVRTILLRAGDFFGG TGSGSWFDLVVAAKMSKGVYTAPGPVDLVHEWAYLPDFAVGFVALARNLDRLGSYEALNFPGHAVTDLEIKAAAEKALGR PLKMTSMPWWVLRAGSPFVAMWREIVSMSYLRFEPHQLASTRLEGIIGEIPHTPLDQAVAQALEDIGIATVKGMKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34302; Mature: 34171
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIAILGANGRLGRVVAKAFIDAGFDVRTVTRTGKVPAELDGATAVAGDALDRQSLISA CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHH TEGVDIIFNGLNPIYTDWGKCLPMAENVMAACHANNALHLFPGTVYNYGSPMPAVITEDT HCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEECCC PFHPTTEKGRIRCAMEELFRREADAGRVRTILLRAGDFFGGTGSGSWFDLVVAAKMSKGV CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCE YTAPGPVDLVHEWAYLPDFAVGFVALARNLDRLGSYEALNFPGHAVTDLEIKAAAEKALG EECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCHHHHHHHHHCC RPLKMTSMPWWVLRAGSPFVAMWREIVSMSYLRFEPHQLASTRLEGIIGEIPHTPLDQAV CCEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH AQALEDIGIATVKGMKAA HHHHHHCCHHCCCCCCCC >Mature Secondary Structure TKIAILGANGRLGRVVAKAFIDAGFDVRTVTRTGKVPAELDGATAVAGDALDRQSLISA CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHH TEGVDIIFNGLNPIYTDWGKCLPMAENVMAACHANNALHLFPGTVYNYGSPMPAVITEDT HCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEECCC PFHPTTEKGRIRCAMEELFRREADAGRVRTILLRAGDFFGGTGSGSWFDLVVAAKMSKGV CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCE YTAPGPVDLVHEWAYLPDFAVGFVALARNLDRLGSYEALNFPGHAVTDLEIKAAAEKALG EECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCHHHHHHHHHCC RPLKMTSMPWWVLRAGSPFVAMWREIVSMSYLRFEPHQLASTRLEGIIGEIPHTPLDQAV CCEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH AQALEDIGIATVKGMKAA HHHHHHCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA