| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is qorA [H]
Identifier: 13473234
GI number: 13473234
Start: 3031306
End: 3032286
Strand: Reverse
Name: qorA [H]
Synonym: mll3767
Alternate gene names: 13473234
Gene position: 3032286-3031306 (Counterclockwise)
Preceding gene: 13473238
Following gene: 13473233
Centisome position: 43.1
GC content: 65.95
Gene sequence:
>981_bases ATGACGGCAATCGCTATCTCGGTACCGGGTGGCCCACGGGTGCTGAAACCGGAAACGCGCGATGTGCCGCAGCCCGGCCC AGGTGAGATCCTGATCAAGGTGCATGCCGCCGGCGTCAACCGGCCCGACGTGCAGCAGCGCAAGGGCGCCTATCCGCCGC CGCCCGGCGCATCGGACCTGCCGGGCCTCGAAGTGTCGGGCGAAGTGGCTGCCCTTGGCGACGAGATATCGCGCTGGCGC ATCGGCGACCGGGTGTGCGCGCTGACTCCCGGCGGCGGCTATGCCGAATATGTCAAGGTTCACTCCGGCAGCGTGCTGCC GCTGCCCGCCGGTTTCACCCACACCGAAGCAGCGGCGGTGCCGGAAAACTATTTCACCGTCTGGCACAATGTGTTCGAAC GCGGCGCCCTGAAGAAAGGCGAGACGCTGCTGGTGCATGGCGGCTCGTCCGGCATCGGCACGACGGCGATCCAGCTGGCT TCGGCCTTCGGCGCCTATGTCATCACCACCGCCGGGTCCAAGGAGAAATGCGACGCCTGCCTGAAGCTCGGCGCCGACCG GGCGATCAATTACCGCGAGGAAGATTTCGTCACGGCGGTCAAGGAGGCGACGGATGGCAAGGGCGCCACTGTCATCCTCG ACATGGTCGGCGGCGACTATGTCCAGCGCAACTACGAGGCGGCAGCCGTCGAGGGCCGCATTGTCCAGATCGCCGTGCAG GCTGGTGCTGTCGCCAGCGCCGATTTTTCGAAGATCATGGTCAAGCGGCTGACCCACACCGGTTCGACGCTCAGGCCGCG CACTGTCGAGTTCAAGGCGGCGATCGCAGCGGCGCTGGAGGCACAGGTGTGGCCGCTGCTCGGCACACGCAAGGTCGCAC CTGTCATGGACATGATCTACCCGCTTACCGATGCCTGGCGTGCGCATGAGCGGATGGAGGAGGGCGAGCATATTGGCAAG ATCGTGCTCGACGTCGGCTAG
Upstream 100 bases:
>100_bases AGCATACATAGGGCAAGGGCGTCGATGCAAACAGCCGGTAAGAATGCGGCGAGGAAAGACGGGAAACTTCATGGCGAGCG GACAAAAAATTCCGGCGAGG
Downstream 100 bases:
>100_bases GACGGCGATATTCAGGTGAGCCCGGCCTGCGAATGGCGGCTTCCTGCGCTTCCGGTGCTCACGTACCCTAGTACGCTCCG CTCCGGTTCTCGGAAACCAC
Product: NADPH quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTAIAISVPGGPRVLKPETRDVPQPGPGEILIKVHAAGVNRPDVQQRKGAYPPPPGASDLPGLEVSGEVAALGDEISRWR IGDRVCALTPGGGYAEYVKVHSGSVLPLPAGFTHTEAAAVPENYFTVWHNVFERGALKKGETLLVHGGSSGIGTTAIQLA SAFGAYVITTAGSKEKCDACLKLGADRAINYREEDFVTAVKEATDGKGATVILDMVGGDYVQRNYEAAAVEGRIVQIAVQ AGAVASADFSKIMVKRLTHTGSTLRPRTVEFKAAIAAALEAQVWPLLGTRKVAPVMDMIYPLTDAWRAHERMEEGEHIGK IVLDVG
Sequences:
>Translated_326_residues MTAIAISVPGGPRVLKPETRDVPQPGPGEILIKVHAAGVNRPDVQQRKGAYPPPPGASDLPGLEVSGEVAALGDEISRWR IGDRVCALTPGGGYAEYVKVHSGSVLPLPAGFTHTEAAAVPENYFTVWHNVFERGALKKGETLLVHGGSSGIGTTAIQLA SAFGAYVITTAGSKEKCDACLKLGADRAINYREEDFVTAVKEATDGKGATVILDMVGGDYVQRNYEAAAVEGRIVQIAVQ AGAVASADFSKIMVKRLTHTGSTLRPRTVEFKAAIAAALEAQVWPLLGTRKVAPVMDMIYPLTDAWRAHERMEEGEHIGK IVLDVG >Mature_325_residues TAIAISVPGGPRVLKPETRDVPQPGPGEILIKVHAAGVNRPDVQQRKGAYPPPPGASDLPGLEVSGEVAALGDEISRWRI GDRVCALTPGGGYAEYVKVHSGSVLPLPAGFTHTEAAAVPENYFTVWHNVFERGALKKGETLLVHGGSSGIGTTAIQLAS AFGAYVITTAGSKEKCDACLKLGADRAINYREEDFVTAVKEATDGKGATVILDMVGGDYVQRNYEAAAVEGRIVQIAVQA GAVASADFSKIMVKRLTHTGSTLRPRTVEFKAAIAAALEAQVWPLLGTRKVAPVMDMIYPLTDAWRAHERMEEGEHIGKI VLDVG
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=42.4242424242424, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=42.4242424242424, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI194239674, Length=329, Percent_Identity=33.434650455927, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI13236495, Length=329, Percent_Identity=33.434650455927, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI194239676, Length=329, Percent_Identity=31.306990881459, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI24308257, Length=344, Percent_Identity=28.7790697674419, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI18379349, Length=330, Percent_Identity=26.6666666666667, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI41872631, Length=314, Percent_Identity=30.8917197452229, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI28557745, Length=328, Percent_Identity=30.1829268292683, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI47519420, Length=342, Percent_Identity=27.7777777777778, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI197927207, Length=198, Percent_Identity=29.7979797979798, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI1790485, Length=314, Percent_Identity=33.4394904458599, Blast_Score=138, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17507255, Length=316, Percent_Identity=26.8987341772152, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI212642053, Length=306, Percent_Identity=28.4313725490196, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71987554, Length=356, Percent_Identity=24.438202247191, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536829, Length=200, Percent_Identity=26.5, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=328, Percent_Identity=28.9634146341463, Blast_Score=109, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6323961, Length=340, Percent_Identity=26.4705882352941, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319621, Length=340, Percent_Identity=27.6470588235294, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6324486, Length=340, Percent_Identity=26.4705882352941, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI221330659, Length=297, Percent_Identity=29.6296296296296, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI19920632, Length=297, Percent_Identity=29.6296296296296, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24581345, Length=297, Percent_Identity=27.9461279461279, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34485; Mature: 34354
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIAISVPGGPRVLKPETRDVPQPGPGEILIKVHAAGVNRPDVQQRKGAYPPPPGASDL CEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCCCC PGLEVSGEVAALGDEISRWRIGDRVCALTPGGGYAEYVKVHSGSVLPLPAGFTHTEAAAV CCCCCCCCHHHHHHHHHHEECCCEEEEECCCCCCEEEEEEECCCEEECCCCCCCCHHHHC PENYFTVWHNVFERGALKKGETLLVHGGSSGIGTTAIQLASAFGAYVITTAGSKEKCDAC CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHH LKLGADRAINYREEDFVTAVKEATDGKGATVILDMVGGDYVQRNYEAAAVEGRIVQIAVQ HHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEECCEEEEEEEE AGAVASADFSKIMVKRLTHTGSTLRPRTVEFKAAIAAALEAQVWPLLGTRKVAPVMDMIY CCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH PLTDAWRAHERMEEGEHIGKIVLDVG HHHHHHHHHHHHHCCCCEEEEEEECC >Mature Secondary Structure TAIAISVPGGPRVLKPETRDVPQPGPGEILIKVHAAGVNRPDVQQRKGAYPPPPGASDL EEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCCCC PGLEVSGEVAALGDEISRWRIGDRVCALTPGGGYAEYVKVHSGSVLPLPAGFTHTEAAAV CCCCCCCCHHHHHHHHHHEECCCEEEEECCCCCCEEEEEEECCCEEECCCCCCCCHHHHC PENYFTVWHNVFERGALKKGETLLVHGGSSGIGTTAIQLASAFGAYVITTAGSKEKCDAC CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHH LKLGADRAINYREEDFVTAVKEATDGKGATVILDMVGGDYVQRNYEAAAVEGRIVQIAVQ HHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEECCEEEEEEEE AGAVASADFSKIMVKRLTHTGSTLRPRTVEFKAAIAAALEAQVWPLLGTRKVAPVMDMIY CCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH PLTDAWRAHERMEEGEHIGKIVLDVG HHHHHHHHHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]