Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473233

Identifier: 13473233

GI number: 13473233

Start: 3030875

End: 3031054

Strand: Reverse

Name: 13473233

Synonym: msl3766

Alternate gene names: NA

Gene position: 3031054-3030875 (Counterclockwise)

Preceding gene: 13473234

Following gene: 13473232

Centisome position: 43.08

GC content: 60.56

Gene sequence:

>180_bases
GTGCAGCATCGAAACGAACACCCCATCAGGAGGACTACCATGAACCCGATCCGCGCTTTCCGTAACTGGCGCATGTACAA
CGAGACCGTGCGCGAACTGAACCGTCTCAACGCGCGTCAGCTCAGCGATCTCGGCATCAACCGCGCCGACATCGAACGGA
TCGCCCGCCAGGCGATCTGA

Upstream 100 bases:

>100_bases
GCTGCCTACAAGATGAACAGAGGCTTAATGGTGCAATGCAGCATTTGCATCATTGCTATGCAAAATCGGCCGTTCAAGTC
CCCATCGATGATCACTATCT

Downstream 100 bases:

>100_bases
TATCAAGCATGACCCGGCCGCAGGGCCGGGCTCGTGTTGAGAAGTAGAGCCGTCGCAGACGTTCCCCGTTTCCGGTTCCG
AGCCCGCTGGACCTCGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI

Sequences:

>Translated_59_residues
MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI
>Mature_59_residues
MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI

Specific function: Unknown

COG id: COG5457

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7214; Mature: 7214

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA