| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473233
Identifier: 13473233
GI number: 13473233
Start: 3030875
End: 3031054
Strand: Reverse
Name: 13473233
Synonym: msl3766
Alternate gene names: NA
Gene position: 3031054-3030875 (Counterclockwise)
Preceding gene: 13473234
Following gene: 13473232
Centisome position: 43.08
GC content: 60.56
Gene sequence:
>180_bases GTGCAGCATCGAAACGAACACCCCATCAGGAGGACTACCATGAACCCGATCCGCGCTTTCCGTAACTGGCGCATGTACAA CGAGACCGTGCGCGAACTGAACCGTCTCAACGCGCGTCAGCTCAGCGATCTCGGCATCAACCGCGCCGACATCGAACGGA TCGCCCGCCAGGCGATCTGA
Upstream 100 bases:
>100_bases GCTGCCTACAAGATGAACAGAGGCTTAATGGTGCAATGCAGCATTTGCATCATTGCTATGCAAAATCGGCCGTTCAAGTC CCCATCGATGATCACTATCT
Downstream 100 bases:
>100_bases TATCAAGCATGACCCGGCCGCAGGGCCGGGCTCGTGTTGAGAAGTAGAGCCGTCGCAGACGTTCCCCGTTTCCGGTTCCG AGCCCGCTGGACCTCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI
Sequences:
>Translated_59_residues MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI >Mature_59_residues MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI
Specific function: Unknown
COG id: COG5457
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7214; Mature: 7214
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MQHRNEHPIRRTTMNPIRAFRNWRMYNETVRELNRLNARQLSDLGINRADIERIARQAI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA