| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473176
Identifier: 13473176
GI number: 13473176
Start: 2976389
End: 2977699
Strand: Reverse
Name: 13473176
Synonym: mll3685
Alternate gene names: NA
Gene position: 2977699-2976389 (Counterclockwise)
Preceding gene: 13473178
Following gene: 13473174
Centisome position: 42.32
GC content: 62.55
Gene sequence:
>1311_bases ATGATACGCACCCTTTTAGCCACGACCGCACTCGCAACGTTGATCTCGACGGGCGCCTTCGCGCAGAGCACGACGACCCC CGCACCTGCCACCGCACCGTCCGTCCAGGAGCCGGCCGCGGCCGTTCCGGTGCCGCGCGCTGAAGGCAACATCGTCACCA ACATCATCGGCGAATCCGTCTATAACGGCACCGGCGATGATGCCGAGAACATCGGCAAGGTCAGCGATGTCGTCTTCGAC AAGGACGGCATGGCCAAATCTGTCGTCATCGGCGTCGGCGGTTTCCTCGGCGTTGGCACAAAGAACGTCGCCTTCGACTA CGACAAGCTGCAATGGGCCGAGAAAAACGGCGACCGCTGGCTGGTTGCCCAGACGACCAAGGATGAACTGAAGGCGCATC CGGAGTTCGACAGCAAGCCCTATGGGTCTGCGCCGGCTCCTGCCACTTCGACCGACGCGGCAGCACCGAAAACGCCTGCG GCAACGGATACCGCACAGGCTCCCGCAGCCGCCCCGGCCGAACCGGTGAAGCGCGCCGACGGCAACCTAGCCACCAACAT CATTGGCAAAACCGTCTACAACGGCACGGGCGATGATGCGCAGAATATTGGCAGCGTCAACGACATCGTGCTGTCCAAGG AAGGCAAGGCCGAATCCCTAGTGATCGGCGTAGGCGGCTTCCTTGGCCTCGGCGCCAAGAATGTCACCTATGATTTCAAC AAGGCGCAGTGGGCGGAGAAGAACGGTGACCGCTGGCTGGTGGCTCAGACCACCAAGGAAGCGCTGCAGGCGCAGCCGGA TTTCAACCGCAAGGCCTATGATCCAGCGCCGGCAACGACGGCATCGAATGCGCCGGCGGCAACAGCTCCGGCCGCGACCA CGGCTCCTGCCACCGCCCCCACGGGCAAGACGGCCGAAGCACCGGCGGCCACGACCGCTCCTGACCAGACGCAGACCGCT GCCATCGACAAGTCGACGCTGACCGCGATGCCGGTCGGCGAGATCAAGGCCAGCGATCTGAAGGGCACCACTGTCTACGG CGCCAATGACGCCAAGGTCGGAGAGATCGGCGATGTCGTGCTGACGCCCGACAAGAAGACGGATGCGGTGATCGTCAATG TCGGCGGCTTCCTTGGCATCGGCACGAAGGAGGTGGCGGTCGGCCTGGATAATCTGAAGTTCATGACCGACAAGAACGGC AAGAAGTATCTCTATACCACTTTCACCAAGGAACAGCTCGAGGCGCAGCCTGCCTATGACAAGGGCAGCTATGCCGAGAA GCGCGACCAGCAGCGGATGATTGTGAAGTAA
Upstream 100 bases:
>100_bases TCACGACGTTGTGAACCCGTGGAGATGCCGCGCCCGATCTTCCCAGCGACGGTTCAAGCGGGCGCGGCGTGCACGAAATC ACGCACCAGGAGAGACTACC
Downstream 100 bases:
>100_bases GGCAGTAGGCAGTAGGCAGTAGGCAGTAGGCAGTAGGCAGTAGGCAAGCCCTATTCCCTACTGCCTATTCCCTTGCTGAC ATGTCCCACCACGCCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel; PRC Protein
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MIRTLLATTALATLISTGAFAQSTTTPAPATAPSVQEPAAAVPVPRAEGNIVTNIIGESVYNGTGDDAENIGKVSDVVFD KDGMAKSVVIGVGGFLGVGTKNVAFDYDKLQWAEKNGDRWLVAQTTKDELKAHPEFDSKPYGSAPAPATSTDAAAPKTPA ATDTAQAPAAAPAEPVKRADGNLATNIIGKTVYNGTGDDAQNIGSVNDIVLSKEGKAESLVIGVGGFLGLGAKNVTYDFN KAQWAEKNGDRWLVAQTTKEALQAQPDFNRKAYDPAPATTASNAPAATAPAATTAPATAPTGKTAEAPAATTAPDQTQTA AIDKSTLTAMPVGEIKASDLKGTTVYGANDAKVGEIGDVVLTPDKKTDAVIVNVGGFLGIGTKEVAVGLDNLKFMTDKNG KKYLYTTFTKEQLEAQPAYDKGSYAEKRDQQRMIVK
Sequences:
>Translated_436_residues MIRTLLATTALATLISTGAFAQSTTTPAPATAPSVQEPAAAVPVPRAEGNIVTNIIGESVYNGTGDDAENIGKVSDVVFD KDGMAKSVVIGVGGFLGVGTKNVAFDYDKLQWAEKNGDRWLVAQTTKDELKAHPEFDSKPYGSAPAPATSTDAAAPKTPA ATDTAQAPAAAPAEPVKRADGNLATNIIGKTVYNGTGDDAQNIGSVNDIVLSKEGKAESLVIGVGGFLGLGAKNVTYDFN KAQWAEKNGDRWLVAQTTKEALQAQPDFNRKAYDPAPATTASNAPAATAPAATTAPATAPTGKTAEAPAATTAPDQTQTA AIDKSTLTAMPVGEIKASDLKGTTVYGANDAKVGEIGDVVLTPDKKTDAVIVNVGGFLGIGTKEVAVGLDNLKFMTDKNG KKYLYTTFTKEQLEAQPAYDKGSYAEKRDQQRMIVK >Mature_436_residues MIRTLLATTALATLISTGAFAQSTTTPAPATAPSVQEPAAAVPVPRAEGNIVTNIIGESVYNGTGDDAENIGKVSDVVFD KDGMAKSVVIGVGGFLGVGTKNVAFDYDKLQWAEKNGDRWLVAQTTKDELKAHPEFDSKPYGSAPAPATSTDAAAPKTPA ATDTAQAPAAAPAEPVKRADGNLATNIIGKTVYNGTGDDAQNIGSVNDIVLSKEGKAESLVIGVGGFLGLGAKNVTYDFN KAQWAEKNGDRWLVAQTTKEALQAQPDFNRKAYDPAPATTASNAPAATAPAATTAPATAPTGKTAEAPAATTAPDQTQTA AIDKSTLTAMPVGEIKASDLKGTTVYGANDAKVGEIGDVVLTPDKKTDAVIVNVGGFLGIGTKEVAVGLDNLKFMTDKNG KKYLYTTFTKEQLEAQPAYDKGSYAEKRDQQRMIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45110; Mature: 45110
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTLLATTALATLISTGAFAQSTTTPAPATAPSVQEPAAAVPVPRAEGNIVTNIIGESV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHH YNGTGDDAENIGKVSDVVFDKDGMAKSVVIGVGGFLGVGTKNVAFDYDKLQWAEKNGDRW CCCCCCCHHHHHHHHHEEECCCCCCEEEEEECCHHHCCCCCCEEECHHHHHHHCCCCCEE LVAQTTKDELKAHPEFDSKPYGSAPAPATSTDAAAPKTPAATDTAQAPAAAPAEPVKRAD EEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC GNLATNIIGKTVYNGTGDDAQNIGSVNDIVLSKEGKAESLVIGVGGFLGLGAKNVTYDFN CCEEHHHHHHHEECCCCCCHHHCCCCCEEEEECCCCCCEEEEECCHHHCCCCCCEEEECC KAQWAEKNGDRWLVAQTTKEALQAQPDFNRKAYDPAPATTASNAPAATAPAATTAPATAP CHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGKTAEAPAATTAPDQTQTAAIDKSTLTAMPVGEIKASDLKGTTVYGANDAKVGEIGDVV CCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEE LTPDKKTDAVIVNVGGFLGIGTKEVAVGLDNLKFMTDKNGKKYLYTTFTKEQLEAQPAYD ECCCCCCCEEEEECCCEECCCHHHHEECCCCEEEEECCCCCEEEEEECCHHHHHCCCCCC KGSYAEKRDQQRMIVK CCCHHHHHHCCCCCCC >Mature Secondary Structure MIRTLLATTALATLISTGAFAQSTTTPAPATAPSVQEPAAAVPVPRAEGNIVTNIIGESV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHH YNGTGDDAENIGKVSDVVFDKDGMAKSVVIGVGGFLGVGTKNVAFDYDKLQWAEKNGDRW CCCCCCCHHHHHHHHHEEECCCCCCEEEEEECCHHHCCCCCCEEECHHHHHHHCCCCCEE LVAQTTKDELKAHPEFDSKPYGSAPAPATSTDAAAPKTPAATDTAQAPAAAPAEPVKRAD EEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC GNLATNIIGKTVYNGTGDDAQNIGSVNDIVLSKEGKAESLVIGVGGFLGLGAKNVTYDFN CCEEHHHHHHHEECCCCCCHHHCCCCCEEEEECCCCCCEEEEECCHHHCCCCCCEEEECC KAQWAEKNGDRWLVAQTTKEALQAQPDFNRKAYDPAPATTASNAPAATAPAATTAPATAP CHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGKTAEAPAATTAPDQTQTAAIDKSTLTAMPVGEIKASDLKGTTVYGANDAKVGEIGDVV CCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEE LTPDKKTDAVIVNVGGFLGIGTKEVAVGLDNLKFMTDKNGKKYLYTTFTKEQLEAQPAYD ECCCCCCCEEEEECCCEECCCHHHHEECCCCEEEEECCCCCEEEEEECCHHHHHCCCCCC KGSYAEKRDQQRMIVK CCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA