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The map label for this gene is p49 [H]

Identifier: 13473167

GI number: 13473167

Start: 2966789

End: 2968408

Strand: Direct

Name: p49 [H]

Synonym: mlr3674

Alternate gene names: 13473167

Gene position: 2966789-2968408 (Clockwise)

Preceding gene: 13473161

Following gene: 13473168

Centisome position: 42.17

GC content: 65.0

Gene sequence:

>1620_bases
ATGAAAGCTTGGGATGCGATCGTCATCGGCGGCGGACACAACGGCCTCGTCAATGCCTGCTATCTGCAGCGCGCCGGGCT
CGACGTGCTGGTGGTGGAGAAGAACGACTGGGTCGGGGGCGCGGCCACCAGCCGCGAGTTGACGCCGGGCTTCGTCTATT
CCAATTGCTCCTATGTCTGCTCGCTGTTCCGCCCCGAAATCATGCGCGACCTCGAACTGCCGCGCTTCGGCCTGCAGGTC
ATTTCCTATGAGGGCGGCGCGGTGTTCACCCGCGACGGCGATTACCTCGCCAATTACCGCGACCATGATGCGCACCGCCG
CGAATTCGCGCGCTTCTCCAGGCGCGACGCCGAAGCCTATGACCGCTACGCCCGCGACGTGACGCGGCAGTGCCGCTTCA
TCCAGCCGCTGCTGATGCGCACCGCTCCGGACCCGACCAGCTTCAAGCCGCGCGACATCGGCGAGTTGCTCTATCTCGGC
AAGAAATTCGCCGGCCTGTCGGCGGAGGAAATGGCGCTGACGCTGCGCTTCTGGACGATGTCGATCTCGGATTTCCTCGA
CGAGTATTTCGAGACGGATGTCATCAAGGCGAACTTCGCTTTGTCCGGCATCATCGGCACCGCGCTCGGGCCGATGTCGC
CCGGCACGGCCTACGTGCTGCTGCACCACTATATGGGCGAGGTCGATGGCTCGGTCGGCGCCTGGGGCTATGCGCGCGGC
GGCATGGGCGCCGTCACCAAGGCGCTGGCCGCGTCGTTCAAGGCCTCGGGCGGCACCATCCGCACCGGCGCCGAGGTCGA
CCACGTGCTGGTGAGCCGCGGCAAGGCCAAAGGCGTGGTGCTGGCCGGCGGCGAGGAGGTTTACGGCAAGCTCGTCGTCT
CCAATGCCGACGTGAAGCGCACCTTCCTGAAGCTGGTCGAGGAAAAGGAACTGCCCGATATTTTCCTGCGCCGGGTGAAG
AACTTCAAGATCCGCGGCTCGTCCGGCAAGGTCAACATCGCGCTCGATTCGCTGCCGGAATTCCCGGCGCTGGCGAAGGA
TTCGCCGGTCTATCGCGGCGACATGCATTTCACCGATTCGATCGAGCGCATGGAGCGCGCCTATGACGACTGGAAGGCCG
GGCGCTGGTCGGCGGACCCCTTCCTCGACATGGTCATCCCGACGACGCTCGACCCGACCATGGCGCCGCCGGGCAAGCAC
TTCATGAGCTGCTTCGTGCAATACGCCCCGCCCAAGGTGAATGGCCGCGACTGGACCGACGCCGATCGCGACGGCTTCGC
CGAGAGCGTAGTTGCGCAGATCGCCGAGTACTCGCCCGGCTTCCGCGACCGCATTGTCCATATGGAGGTACGCACGCCGC
GCGAGATCGAGGCCGAGGTCGGCTTGACCGAAGGTAATATTTTCCAGGGTGAACTGACCTTCGACCAGCTTCTGTTCAAC
CGCCCGGTGCCCGGCTACGCGCAGTACCGCTCGCCGGTTGGCGGGCTCTATATGTGCGGCTCCTCGACTCATCCGGGCGG
CGGTGTCATGGGCGCGCCCGGCCGCAATGCCGCCGCCGAAATCCTGCGCGATCTCGCCAAATCCACCTCGCATATGAGCC
TCGCCCATGACGTCATTTGA

Upstream 100 bases:

>100_bases
ATCACGCAAAAATGAACAGCGGGTCGCACAGGGCAATTCCAGGAAAAATGTGGGCGGCTTTCCCTTGGGAATTGCGGAGA
AACAAAGAGGCTGGGCCACA

Downstream 100 bases:

>100_bases
TGCAATCGTCATCGGCGGCGGCCACAATGGCCTTGTCGCCGCAGCCACGTTGGCCAAAGCCGGCCGCAAGGTGCTGGTGT
TGGAGGCTGAAAGCGAAGTC

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MKAWDAIVIGGGHNGLVNACYLQRAGLDVLVVEKNDWVGGAATSRELTPGFVYSNCSYVCSLFRPEIMRDLELPRFGLQV
ISYEGGAVFTRDGDYLANYRDHDAHRREFARFSRRDAEAYDRYARDVTRQCRFIQPLLMRTAPDPTSFKPRDIGELLYLG
KKFAGLSAEEMALTLRFWTMSISDFLDEYFETDVIKANFALSGIIGTALGPMSPGTAYVLLHHYMGEVDGSVGAWGYARG
GMGAVTKALAASFKASGGTIRTGAEVDHVLVSRGKAKGVVLAGGEEVYGKLVVSNADVKRTFLKLVEEKELPDIFLRRVK
NFKIRGSSGKVNIALDSLPEFPALAKDSPVYRGDMHFTDSIERMERAYDDWKAGRWSADPFLDMVIPTTLDPTMAPPGKH
FMSCFVQYAPPKVNGRDWTDADRDGFAESVVAQIAEYSPGFRDRIVHMEVRTPREIEAEVGLTEGNIFQGELTFDQLLFN
RPVPGYAQYRSPVGGLYMCGSSTHPGGGVMGAPGRNAAAEILRDLAKSTSHMSLAHDVI

Sequences:

>Translated_539_residues
MKAWDAIVIGGGHNGLVNACYLQRAGLDVLVVEKNDWVGGAATSRELTPGFVYSNCSYVCSLFRPEIMRDLELPRFGLQV
ISYEGGAVFTRDGDYLANYRDHDAHRREFARFSRRDAEAYDRYARDVTRQCRFIQPLLMRTAPDPTSFKPRDIGELLYLG
KKFAGLSAEEMALTLRFWTMSISDFLDEYFETDVIKANFALSGIIGTALGPMSPGTAYVLLHHYMGEVDGSVGAWGYARG
GMGAVTKALAASFKASGGTIRTGAEVDHVLVSRGKAKGVVLAGGEEVYGKLVVSNADVKRTFLKLVEEKELPDIFLRRVK
NFKIRGSSGKVNIALDSLPEFPALAKDSPVYRGDMHFTDSIERMERAYDDWKAGRWSADPFLDMVIPTTLDPTMAPPGKH
FMSCFVQYAPPKVNGRDWTDADRDGFAESVVAQIAEYSPGFRDRIVHMEVRTPREIEAEVGLTEGNIFQGELTFDQLLFN
RPVPGYAQYRSPVGGLYMCGSSTHPGGGVMGAPGRNAAAEILRDLAKSTSHMSLAHDVI
>Mature_539_residues
MKAWDAIVIGGGHNGLVNACYLQRAGLDVLVVEKNDWVGGAATSRELTPGFVYSNCSYVCSLFRPEIMRDLELPRFGLQV
ISYEGGAVFTRDGDYLANYRDHDAHRREFARFSRRDAEAYDRYARDVTRQCRFIQPLLMRTAPDPTSFKPRDIGELLYLG
KKFAGLSAEEMALTLRFWTMSISDFLDEYFETDVIKANFALSGIIGTALGPMSPGTAYVLLHHYMGEVDGSVGAWGYARG
GMGAVTKALAASFKASGGTIRTGAEVDHVLVSRGKAKGVVLAGGEEVYGKLVVSNADVKRTFLKLVEEKELPDIFLRRVK
NFKIRGSSGKVNIALDSLPEFPALAKDSPVYRGDMHFTDSIERMERAYDDWKAGRWSADPFLDMVIPTTLDPTMAPPGKH
FMSCFVQYAPPKVNGRDWTDADRDGFAESVVAQIAEYSPGFRDRIVHMEVRTPREIEAEVGLTEGNIFQGELTFDQLLFN
RPVPGYAQYRSPVGGLYMCGSSTHPGGGVMGAPGRNAAAEILRDLAKSTSHMSLAHDVI

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=548, Percent_Identity=40.1459854014599, Blast_Score=383, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17540238, Length=534, Percent_Identity=36.8913857677903, Blast_Score=361, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59428; Mature: 59428

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAWDAIVIGGGHNGLVNACYLQRAGLDVLVVEKNDWVGGAATSRELTPGFVYSNCSYVC
CCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEECCCHHHHH
SLFRPEIMRDLELPRFGLQVISYEGGAVFTRDGDYLANYRDHDAHRREFARFSRRDAEAY
HHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHH
DRYARDVTRQCRFIQPLLMRTAPDPTSFKPRDIGELLYLGKKFAGLSAEEMALTLRFWTM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEHHHHH
SISDFLDEYFETDVIKANFALSGIIGTALGPMSPGTAYVLLHHYMGEVDGSVGAWGYARG
HHHHHHHHHHHCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
GMGAVTKALAASFKASGGTIRTGAEVDHVLVSRGKAKGVVLAGGEEVYGKLVVSNADVKR
CHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCEEEEECCHHEEEEEEEECCHHHH
TFLKLVEEKELPDIFLRRVKNFKIRGSSGKVNIALDSLPEFPALAKDSPVYRGDMHFTDS
HHHHHHHHCCCHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCCCCCCCEECCCCHHHH
IERMERAYDDWKAGRWSADPFLDMVIPTTLDPTMAPPGKHFMSCFVQYAPPKVNGRDWTD
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
ADRDGFAESVVAQIAEYSPGFRDRIVHMEVRTPREIEAEVGLTEGNIFQGELTFDQLLFN
CCCCHHHHHHHHHHHHCCCCHHHEEEEEEECCCCHHHHHCCCCCCCEEECCCCHHHHHHC
RPVPGYAQYRSPVGGLYMCGSSTHPGGGVMGAPGRNAAAEILRDLAKSTSHMSLAHDVI
CCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKAWDAIVIGGGHNGLVNACYLQRAGLDVLVVEKNDWVGGAATSRELTPGFVYSNCSYVC
CCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEECCCHHHHH
SLFRPEIMRDLELPRFGLQVISYEGGAVFTRDGDYLANYRDHDAHRREFARFSRRDAEAY
HHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHH
DRYARDVTRQCRFIQPLLMRTAPDPTSFKPRDIGELLYLGKKFAGLSAEEMALTLRFWTM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEHHHHH
SISDFLDEYFETDVIKANFALSGIIGTALGPMSPGTAYVLLHHYMGEVDGSVGAWGYARG
HHHHHHHHHHHCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
GMGAVTKALAASFKASGGTIRTGAEVDHVLVSRGKAKGVVLAGGEEVYGKLVVSNADVKR
CHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCEEEEECCHHEEEEEEEECCHHHH
TFLKLVEEKELPDIFLRRVKNFKIRGSSGKVNIALDSLPEFPALAKDSPVYRGDMHFTDS
HHHHHHHHCCCHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCCCCCCCEECCCCHHHH
IERMERAYDDWKAGRWSADPFLDMVIPTTLDPTMAPPGKHFMSCFVQYAPPKVNGRDWTD
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
ADRDGFAESVVAQIAEYSPGFRDRIVHMEVRTPREIEAEVGLTEGNIFQGELTFDQLLFN
CCCCHHHHHHHHHHHHCCCCHHHEEEEEEECCCCHHHHHCCCCCCCEEECCCCHHHHHHC
RPVPGYAQYRSPVGGLYMCGSSTHPGGGVMGAPGRNAAAEILRDLAKSTSHMSLAHDVI
CCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]