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The map label for this gene is yfjD [H]

Identifier: 13473081

GI number: 13473081

Start: 2877318

End: 2878202

Strand: Reverse

Name: yfjD [H]

Synonym: mll3569

Alternate gene names: 13473081

Gene position: 2878202-2877318 (Counterclockwise)

Preceding gene: 13473082

Following gene: 13473080

Centisome position: 40.91

GC content: 63.39

Gene sequence:

>885_bases
ATGGACAACGGCTGGGTCGTCGTCGCCGTTCTTGCCATCCTCATCCTGCTGGTCATTGCCGTGCGCACGCGTCTTCTCGC
CATGTTCGGCTACGAGCTGTCGCACATCGAGCCGCAGCGCTCGAGCCAGGACGAGTTGCGTGGCGCGGTTGACGATTTCC
GCCGCGATGGCCAGGTGGTGCGCGAGGACCGCGACCGCATCGGCGGCCTGTTCGACCTCGAAGAGCTCGAAGTCTCCGAT
ATCATGGTCCACCGCACCAACATGCGCTCGGTCAATGCCGACAATGCGCCGGAAGCGGTGGTGCGCGAGATCCTGCAGAG
CCCGCACACCCGCATGCCGCTGTGGAAAGGCTCGCTCGACAACATTGTCGGCGTGCTGCATGCCAAGGACCTGCTGCGCG
CGCTGAACGAAGTCGGCAACGACTTTTCCAAGATCGACGTGATGAAGATCGCCTCGAAGCCCTGGTTCGTGCCCGATACC
ACGACCTTGCAGGAACAGCTCAACGCCTTCCTGCGCCGCAAGGCGCATTTCGCCGTCGTCGTCGACGAATATGGCGAGGT
CGAAGGGCTGGTGACGCTGGAGGACATCATCGAGGAGATCGTCGGCGAGATCGCCGACGAGCACGATGTCGACATCCAGG
GCGTCAAGCAGGAGGCCGACGGCTCCGTCGTCGTCGACGGCAATGTGCCGATCCGCGACCTGAACCGGGCGCTGGACTGG
AACCTGCCGGACGAGGAGGCGACAACGATTGCCGGCCTCGTCATCCACGAGGCGCAGTCGATCCCCGACGAGAAGCAGGC
TTTTACGTTCCACGGCAAGCGCTTCATCGTCATGAAGCGCGACAAGAACCGGATCGCCCGGTTGAGGATCAGGCCGATCG
CGTAG

Upstream 100 bases:

>100_bases
CGCGGCATCGGCCAGGCTTTCATCGCCAAGGACGTTCCGGCTTCGGAAGTGCTGTCGTTCCTGAGGGAAAACCATCCAAC
CAGCCGGAAAGCCGGCTGAA

Downstream 100 bases:

>100_bases
CGTCACTTTCGGCCACGTTACCGATCCTTCATTGGAACTTCGCGGCGTCCCGGTGCATTTTGCGCCAGGCGTTCAGGAGA
AGATGATGATCGATCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MDNGWVVVAVLAILILLVIAVRTRLLAMFGYELSHIEPQRSSQDELRGAVDDFRRDGQVVREDRDRIGGLFDLEELEVSD
IMVHRTNMRSVNADNAPEAVVREILQSPHTRMPLWKGSLDNIVGVLHAKDLLRALNEVGNDFSKIDVMKIASKPWFVPDT
TTLQEQLNAFLRRKAHFAVVVDEYGEVEGLVTLEDIIEEIVGEIADEHDVDIQGVKQEADGSVVVDGNVPIRDLNRALDW
NLPDEEATTIAGLVIHEAQSIPDEKQAFTFHGKRFIVMKRDKNRIARLRIRPIA

Sequences:

>Translated_294_residues
MDNGWVVVAVLAILILLVIAVRTRLLAMFGYELSHIEPQRSSQDELRGAVDDFRRDGQVVREDRDRIGGLFDLEELEVSD
IMVHRTNMRSVNADNAPEAVVREILQSPHTRMPLWKGSLDNIVGVLHAKDLLRALNEVGNDFSKIDVMKIASKPWFVPDT
TTLQEQLNAFLRRKAHFAVVVDEYGEVEGLVTLEDIIEEIVGEIADEHDVDIQGVKQEADGSVVVDGNVPIRDLNRALDW
NLPDEEATTIAGLVIHEAQSIPDEKQAFTFHGKRFIVMKRDKNRIARLRIRPIA
>Mature_294_residues
MDNGWVVVAVLAILILLVIAVRTRLLAMFGYELSHIEPQRSSQDELRGAVDDFRRDGQVVREDRDRIGGLFDLEELEVSD
IMVHRTNMRSVNADNAPEAVVREILQSPHTRMPLWKGSLDNIVGVLHAKDLLRALNEVGNDFSKIDVMKIASKPWFVPDT
TTLQEQLNAFLRRKAHFAVVVDEYGEVEGLVTLEDIIEEIVGEIADEHDVDIQGVKQEADGSVVVDGNVPIRDLNRALDW
NLPDEEATTIAGLVIHEAQSIPDEKQAFTFHGKRFIVMKRDKNRIARLRIRPIA

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=214, Percent_Identity=28.5046728971963, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI94681046, Length=163, Percent_Identity=33.1288343558282, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI40068055, Length=163, Percent_Identity=32.5153374233129, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI40068053, Length=163, Percent_Identity=32.5153374233129, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI145693175, Length=250, Percent_Identity=33.6, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1786879, Length=275, Percent_Identity=29.4545454545455, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI87082033, Length=237, Percent_Identity=29.957805907173, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1790664, Length=269, Percent_Identity=25.2788104089219, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788119, Length=209, Percent_Identity=33.0143540669856, Blast_Score=91, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6324512, Length=216, Percent_Identity=28.7037037037037, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 33179; Mature: 33179

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNGWVVVAVLAILILLVIAVRTRLLAMFGYELSHIEPQRSSQDELRGAVDDFRRDGQVV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCHHH
REDRDRIGGLFDLEELEVSDIMVHRTNMRSVNADNAPEAVVREILQSPHTRMPLWKGSLD
HHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH
NIVGVLHAKDLLRALNEVGNDFSKIDVMKIASKPWFVPDTTTLQEQLNAFLRRKAHFAVV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
VDEYGEVEGLVTLEDIIEEIVGEIADEHDVDIQGVKQEADGSVVVDGNVPIRDLNRALDW
EECCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEECCCCHHHHHHHHCC
NLPDEEATTIAGLVIHEAQSIPDEKQAFTFHGKRFIVMKRDKNRIARLRIRPIA
CCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEEECCCCCEEEEEEECCC
>Mature Secondary Structure
MDNGWVVVAVLAILILLVIAVRTRLLAMFGYELSHIEPQRSSQDELRGAVDDFRRDGQVV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCHHH
REDRDRIGGLFDLEELEVSDIMVHRTNMRSVNADNAPEAVVREILQSPHTRMPLWKGSLD
HHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH
NIVGVLHAKDLLRALNEVGNDFSKIDVMKIASKPWFVPDTTTLQEQLNAFLRRKAHFAVV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
VDEYGEVEGLVTLEDIIEEIVGEIADEHDVDIQGVKQEADGSVVVDGNVPIRDLNRALDW
EECCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEECCCCHHHHHHHHCC
NLPDEEATTIAGLVIHEAQSIPDEKQAFTFHGKRFIVMKRDKNRIARLRIRPIA
CCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]