| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yihV [H]
Identifier: 13473051
GI number: 13473051
Start: 2850519
End: 2851448
Strand: Direct
Name: yihV [H]
Synonym: mlr3534
Alternate gene names: 13473051
Gene position: 2850519-2851448 (Clockwise)
Preceding gene: 13473050
Following gene: 13473054
Centisome position: 40.51
GC content: 69.46
Gene sequence:
>930_bases ATGGCAAGCCCCCCGAGGCTCCTCAGCGTCGGCGCGCTGACGCTGGATACCATCCTGCGTGTCGAGACGCTGCCCACGCA CCAGGGCAAGTTCATCGCCGCAGACGGTGTCCAGATCGCCTCGGGCATGGCCACCAGTGCTGCCTGCGCCGCGCATCGCC TCGGCGCCGAGGTGTCGCTGTGGGCCAGCGCCGGCGATGACCTCATTGGCGAACAGCTGATTGCCGGAATCGAGGCCGAG GGTGTCGATTGCAGCTATGTCCGCCGAGTCAGCGGCGCCCGCTCGGCATTGGCTTCGATCCTGGTCGACGCCCATGGCGA GCGCATCATCGTGCCTTTCTACGACAGCCTGGCGCAGGCCGATCCCGAAACCTTGCCTTTCGCCGACATCACGGCATTCG ATGCCGTGCTGGTGGACGTGCGCTGGCCTGACGCCGCGGCCCTTGCCCTCAAGGCGGCGCGCGCGGCCGGGCGGCCGGCA ATCCTCGATGCCGACACGGCCTCGCTGGCGGTGCTGGAGCGGCTGTTGCCGCTGGCTTCGCACATCGTCGCCTCCGAGCC GGCGGTCCGCATCATATGCGGCCAGGCGCTGGATCTGGCGAGCGCTTGCACCGACATGGCCTCCCGCACCGACGCATTCG TCGCGGTCACCGGCGGCGCAGCAGGCATCTGGTGGTTCGATCGCAAAGCGGGATCATCCCGTCATGTCGCGGCGCCGAGG ATCAAAGCGGTCGACACGCTCGCCGCCGGCGACGTCTTTCACGGCGCCTTTGCCGTCGGACTGGCGGAGGCCATGCCGGT CGAGCAGGCCTTGCGCTTTGCAAGTGCCGCCGCCGCGCTCAAATGCCTGCGCTTCGGCGGCAGGCTCGGCGCGCCGGACC GGGCCGAGACGCTGGCGATGGTCACGGCGACCTGGCCCGAAACAGCCTAG
Upstream 100 bases:
>100_bases CTCGGCAGCGAACCGTCGATGCCGCTGAAAGTGGTCAAAGGCAAGGCCTCGCTCGGCTTCATCCCGCTCGGCAAGATCAA GCCGGTACAATAGCGCGCCC
Downstream 100 bases:
>100_bases TTCTTCGACGGGTGTTCGACCGCCTGGCGGCCGAAATCGGGCACGTCGATATCCTGGCCGGCCTCGATGATCGAGCGGCG CACGGCGCGGGTGCGGGTGA
Product: sugar kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MASPPRLLSVGALTLDTILRVETLPTHQGKFIAADGVQIASGMATSAACAAHRLGAEVSLWASAGDDLIGEQLIAGIEAE GVDCSYVRRVSGARSALASILVDAHGERIIVPFYDSLAQADPETLPFADITAFDAVLVDVRWPDAAALALKAARAAGRPA ILDADTASLAVLERLLPLASHIVASEPAVRIICGQALDLASACTDMASRTDAFVAVTGGAAGIWWFDRKAGSSRHVAAPR IKAVDTLAAGDVFHGAFAVGLAEAMPVEQALRFASAAAALKCLRFGGRLGAPDRAETLAMVTATWPETA
Sequences:
>Translated_309_residues MASPPRLLSVGALTLDTILRVETLPTHQGKFIAADGVQIASGMATSAACAAHRLGAEVSLWASAGDDLIGEQLIAGIEAE GVDCSYVRRVSGARSALASILVDAHGERIIVPFYDSLAQADPETLPFADITAFDAVLVDVRWPDAAALALKAARAAGRPA ILDADTASLAVLERLLPLASHIVASEPAVRIICGQALDLASACTDMASRTDAFVAVTGGAAGIWWFDRKAGSSRHVAAPR IKAVDTLAAGDVFHGAFAVGLAEAMPVEQALRFASAAAALKCLRFGGRLGAPDRAETLAMVTATWPETA >Mature_308_residues ASPPRLLSVGALTLDTILRVETLPTHQGKFIAADGVQIASGMATSAACAAHRLGAEVSLWASAGDDLIGEQLIAGIEAEG VDCSYVRRVSGARSALASILVDAHGERIIVPFYDSLAQADPETLPFADITAFDAVLVDVRWPDAAALALKAARAAGRPAI LDADTASLAVLERLLPLASHIVASEPAVRIICGQALDLASACTDMASRTDAFVAVTGGAAGIWWFDRKAGSSRHVAAPRI KAVDTLAAGDVFHGAFAVGLAEAMPVEQALRFASAAAALKCLRFGGRLGAPDRAETLAMVTATWPETA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082343, Length=297, Percent_Identity=40.4040404040404, Blast_Score=193, Evalue=1e-50, Organism=Escherichia coli, GI1790193, Length=310, Percent_Identity=29.3548387096774, Blast_Score=84, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17532905, Length=289, Percent_Identity=25.6055363321799, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 31860; Mature: 31728
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPPRLLSVGALTLDTILRVETLPTHQGKFIAADGVQIASGMATSAACAAHRLGAEVSL CCCCCCEEEEHHHHHHHHHHHEECCCCCCCEEEECCCHHHCCCHHHHHHHHHHCCCCEEE WASAGDDLIGEQLIAGIEAEGVDCSYVRRVSGARSALASILVDAHGERIIVPFYDSLAQA EECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHC DPETLPFADITAFDAVLVDVRWPDAAALALKAARAAGRPAILDADTASLAVLERLLPLAS CCCCCCCHHHHHEEEEEEEEECCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH HIVASEPAVRIICGQALDLASACTDMASRTDAFVAVTGGAAGIWWFDRKAGSSRHVAAPR HHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCC IKAVDTLAAGDVFHGAFAVGLAEAMPVEQALRFASAAAALKCLRFGGRLGAPDRAETLAM HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEE VTATWPETA EEECCCCCC >Mature Secondary Structure ASPPRLLSVGALTLDTILRVETLPTHQGKFIAADGVQIASGMATSAACAAHRLGAEVSL CCCCCEEEEHHHHHHHHHHHEECCCCCCCEEEECCCHHHCCCHHHHHHHHHHCCCCEEE WASAGDDLIGEQLIAGIEAEGVDCSYVRRVSGARSALASILVDAHGERIIVPFYDSLAQA EECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHC DPETLPFADITAFDAVLVDVRWPDAAALALKAARAAGRPAILDADTASLAVLERLLPLAS CCCCCCCHHHHHEEEEEEEEECCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH HIVASEPAVRIICGQALDLASACTDMASRTDAFVAVTGGAAGIWWFDRKAGSSRHVAAPR HHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCC IKAVDTLAAGDVFHGAFAVGLAEAMPVEQALRFASAAAALKCLRFGGRLGAPDRAETLAM HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEE VTATWPETA EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]