| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yfiK [C]
Identifier: 13473047
GI number: 13473047
Start: 2847055
End: 2847681
Strand: Reverse
Name: yfiK [C]
Synonym: mll3530
Alternate gene names: 13473047
Gene position: 2847681-2847055 (Counterclockwise)
Preceding gene: 13473048
Following gene: 13473044
Centisome position: 40.47
GC content: 67.62
Gene sequence:
>627_bases ATGACGGAGCCGCTTCTTTCGCAGCCGCAGCTTTGGCGACCGCTACTCGCCTTGGTGCTGGCCGCCACGGTGGTCATGGG CAGTCCAGGGCCGGCTACGATAAGCGTCACCGCTGTTGGCGCCGCCTTCGGTCTGCGCGATTCTGTGCGCTACACCTTGG GAATCGTCGTCGGCACAATCGCCGTGCTGCTGGTCGTGGCGACCGGGACTATGGCGGTGCTTGGCTCGATACCGAAACTG GCGCCGGTGCTGGTTGTCGCGTCGGCGGCCTACATCCTCTATCTCGCCTTCGGGATCGCCACGGCGCCGCCGCTGGCGGC GCGCACGGCCGAGGCTGCGCGCCCGACCTGGCTGGCCGGGTTTCTGCTGGCGGTCGCCAACCCGAAAGCCTATGTGGCGA TCGCCGCCGTGTTCGCCGGCGCCTCTTCGAGCCAGGGCGGTGCGGAACTCGGCCTATGGCTGAAGCTGACGGTGCTCGCG GCGATGATCGTTGTCATCCATGCCGTGTGGCTGCTTGCCGGCGCGGCGTTCGCGCGCTTCCTGCGCAGGCCTGTTGCTTC GCGGATCATCAACATGGTCTTCGCCGCGACCCTGGTGCTGACCACCGTGCTGGCTGTCTACGGCTGA
Upstream 100 bases:
>100_bases AAGCGAGCGACTGAGGTTCGGCCGCTCTACGCACGAACGTCCAAGACCACGCTCCCGTCTTGCCATAGCGTCCTTCGCTA TTGGCAAGACAGAGGGTGCG
Downstream 100 bases:
>100_bases TTGCTTGGCTAGAGGTCTTCAGACCTTCGCGCCGAGCTCCCGCAGCCGCTTCAACGCCGTCGGCGGCAAGGCGGGCGGGT TGGGCGCGCGCGATGCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTEPLLSQPQLWRPLLALVLAATVVMGSPGPATISVTAVGAAFGLRDSVRYTLGIVVGTIAVLLVVATGTMAVLGSIPKL APVLVVASAAYILYLAFGIATAPPLAARTAEAARPTWLAGFLLAVANPKAYVAIAAVFAGASSSQGGAELGLWLKLTVLA AMIVVIHAVWLLAGAAFARFLRRPVASRIINMVFAATLVLTTVLAVYG
Sequences:
>Translated_208_residues MTEPLLSQPQLWRPLLALVLAATVVMGSPGPATISVTAVGAAFGLRDSVRYTLGIVVGTIAVLLVVATGTMAVLGSIPKL APVLVVASAAYILYLAFGIATAPPLAARTAEAARPTWLAGFLLAVANPKAYVAIAAVFAGASSSQGGAELGLWLKLTVLA AMIVVIHAVWLLAGAAFARFLRRPVASRIINMVFAATLVLTTVLAVYG >Mature_207_residues TEPLLSQPQLWRPLLALVLAATVVMGSPGPATISVTAVGAAFGLRDSVRYTLGIVVGTIAVLLVVATGTMAVLGSIPKLA PVLVVASAAYILYLAFGIATAPPLAARTAEAARPTWLAGFLLAVANPKAYVAIAAVFAGASSSQGGAELGLWLKLTVLAA MIVVIHAVWLLAGAAFARFLRRPVASRIINMVFAATLVLTTVLAVYG
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21259; Mature: 21128
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPLLSQPQLWRPLLALVLAATVVMGSPGPATISVTAVGAAFGLRDSVRYTLGIVVGTI CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH AVLLVVATGTMAVLGSIPKLAPVLVVASAAYILYLAFGIATAPPLAARTAEAARPTWLAG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHH FLLAVANPKAYVAIAAVFAGASSSQGGAELGLWLKLTVLAAMIVVIHAVWLLAGAAFARF HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRPVASRIINMVFAATLVLTTVLAVYG HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEPLLSQPQLWRPLLALVLAATVVMGSPGPATISVTAVGAAFGLRDSVRYTLGIVVGTI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH AVLLVVATGTMAVLGSIPKLAPVLVVASAAYILYLAFGIATAPPLAARTAEAARPTWLAG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHH FLLAVANPKAYVAIAAVFAGASSSQGGAELGLWLKLTVLAAMIVVIHAVWLLAGAAFARF HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRPVASRIINMVFAATLVLTTVLAVYG HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA