| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473032
Identifier: 13473032
GI number: 13473032
Start: 2834316
End: 2836922
Strand: Direct
Name: 13473032
Synonym: mlr3512
Alternate gene names: NA
Gene position: 2834316-2836922 (Clockwise)
Preceding gene: 13473031
Following gene: 13473033
Centisome position: 40.28
GC content: 67.59
Gene sequence:
>2607_bases ATGACGCAACGACCCACCTCTAGCGATCGCGGTCTCGCCGGGCGCCTTGCGCTCAGCCGGCTGGCGACGCGGGTCTCGAT GATGGTCGAGCGCGGCTGGCCGCTGCTGCTGCCGCTGATCCTTATCGCCTGCCTGTTCCTGAGCATCTCCTGGTTCGGCA TTTTCTCCCGGTTGCCGGATGTCGCGCGCATCGGCCTTGTCGCCGCATTCGGCCTGGCAGGGCTGGCAGCGCTCTATCCG CTGCGTTTCTTCCGCCTGCCTGGTGCCGCCGAGGTCGACCGCCGCATCGAGGCCGCCAACGAACTGCTGCACAGCCCCGT GCTGGTGCAGGCCGACCGGCCAAGCGGCCGTGAAAGCAGTTTCTCGCAGGCGCTGTGGCGCGAACACCAGAAGCGCATGG CCGCCAGGCTCGACAGGCTTGGCGCCGACCTGCCGCGCACCCGGGTGCCGGAGCGCGATCCTTGGGGGCTGCGCGCCGTG GCGGCGCTGCTGCTCGTCACCGCCTTTGCCTTCTCCTTCGGGCCGACAGGCGGCAAGATAGCCGACGGCTTCAGCGCCCA CGGCGCGCACGATGCCTTGCCGCCACGCATCGATGCCTGGGTGACGCCGCCCGCCTATACCGGCAAACCGCCGATCTTCC TGACCGCCGACGCCAACCAGGCGACGCCGACGTTTCATGTGCCTGAGGGCAGCGACGTCTCCTTGCGCGTCACCGGAGGC TCGGGCGAGGAAACGCTGGCCTATGCCGACAAGGATGGCAACGCGCGCGTCGTCAACCCTGCCGGACCGCAGGCGGCCAG CGCCAAGCCAGCCGCAAGCCCGGCGGCGCCGGCCCCCGCATCCCCGTCGAAGGTGCGCCAGTTCACCAGCAAACTGACCG GCGACGGCACGCTGACGCTGAAATCGGGCGAGGATCAACTCGGCCGATGGGCCTTCGCCGTGATCGCGGACAAACCGCCG CAGATCCGTTTCGTCGGCGAGCCCAAGCGCGCCGCCAACGGCGCATTCGAGCTCAACTACCAGATCGACGACGATTATGG CGCCGCCACCGCCAAGGCGGTCTTCACGCTGGCCGACCCGCTGGCACCGGGCGCGCATCCGCTCTACGGCCCACCCGAAA TGCCGTTGGCGCTGCCGCGCCGCGGCGGCAAGTCCAATGCCGCCAAGACCACCAAGGACCTGACCGAGCATGTCTGGGCC GGCGGCAGCATCAAGCTGACGCTGGTCGCCACCGATGATGCCGGCCACACCGCGTCCAGCGAAACCAAGACGCTCGTGAT GCCGGAGCGGCCTTTCGCCAACCCGCTGGCGAGGGCGGTGATCGAACAACGCCGCCTGCTGGCGCTCGACGCCAATGCCA AGCCTCACGTGCTCGACCTGATAGACGCCATCACGCTGCGGCCGGAAGACACGTTCGACAACATGTCCCACTATCTCGCC ATCATGAGCGCGCGCAGCCGGCTGAAACTGGCCGGCAACGACGATCAGCTGCGCGGCGAGGTCGCCTATCTCTGGGAAAT CGCGCTCGGCATCGAGGAGGGCAACCTGTCGGCCGCCGAAAAGCGGCTGCGCCAGGCGCAGCAGGCGCTGCAGGACGCCA TCAAGAACGGCGCCAGCGACCAGGAAATCGAGAAGGCGATGAAGGAACTGCGCGAGGCGATGAACCAGTTCCTGCAGGAA TTCGCCGAACGCGCCAAGCAGAACCCGAACGCGCCACAGATGCAGCAGAACGGCCAGGAACTGCGCCAGAGCGACATCGA CCGGATGATGGACCAGATCGAGAACCTGGCGAAGTCGGGCGACCGCGACAAGGCGCAGCAATTGCTGTCGCAGCTGCAGG ACATGATGAACAATCTCCAGGCCGGCCGCCAACAGCAAGGCGGCGAGCAGGACAGCCAGATGCGCCAGCAGATGGACAAG CTCGGCGAGATCCTGCGGCGCCAGCAGGAGATGATGAACGACACCTTCCGCATGGACCAAATGCAGCGCGGCGAGCGCCA GCGCGGACAGAACCGCGACGAGCAGCTTGGCCAAGGCGGCGGCGAGGACCAGGACAAGCCAGGCGTCGGCGAGGACCGCG ATCCGCTCGCCAGGCAAAAGCCGATGACGCCGCAGGAATTCTCCGATGCGCTGAAGCAATTGCAGGAAGGCCAGGGCCAG CTGAAGAGCGATCTCGAGCAGCTGAAGAAGAACCTCGAAGGCATGGGCATGGAGCCCAATGAAGGATTTGGCGAGGCCGG CAAGTCGATGGGCAGCGCCGAGCAGGCGCTTGGCGAGGGCCAGGGCGACGAGGCCGTCGGCCACCAGGGCCGGGCGCTCG AGGCGCTGCGCAAGGGCGCCAAGGACATGATGAAGCAGATGCAAGCCATGCAGGGCGACCAGGGCGGCAGCCAGGAGGGC GGGCGTCAGCAGAATGCCGACCGTGACCCGCTCGGCCGGCCGCGCGCCAGCCAGGGTCCCGATTTCGGCGATTCGGTGAA GGTCCCCGACGAGATCGACGTCCAACGCGCCCGCCAGATCCTGGAGGCGATCCGCAAGCGGCTCGGCAACGCGCTCAGCC CCGATATCGAGCGCAGCTATCTCGAACGGCTGCTCGAGCTGAAGTAG
Upstream 100 bases:
>100_bases GGGCTTCACATTTTCTGAGAGCGCCTCGCCTTTGCCGTGTTTGCTGGTATTCTTCGAGTCGTGAGGATCGGGCTATCCCG CCTGATTCCAGGAAGGGCCG
Downstream 100 bases:
>100_bases GATCGCCCCCCGCCCACCCCCTCTCGAACGGTTCCAACACATGCCGAGGCTCGGTACTGTCACGCCCGTCCTGCGCATCT TCGATGTTGCCAAGGCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 868; Mature: 867
Protein sequence:
>868_residues MTQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPDVARIGLVAAFGLAGLAALYP LRFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESSFSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAV AALLLVTAFAFSFGPTGGKIADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGG SGEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTLKSGEDQLGRWAFAVIADKPP QIRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADPLAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWA GGSIKLTLVATDDAGHTASSETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLA IMSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASDQEIEKAMKELREAMNQFLQE FAERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSGDRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDK LGEILRRQQEMMNDTFRMDQMQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQ LKSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGAKDMMKQMQAMQGDQGGSQEG GRQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQILEAIRKRLGNALSPDIERSYLERLLELK
Sequences:
>Translated_868_residues MTQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPDVARIGLVAAFGLAGLAALYP LRFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESSFSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAV AALLLVTAFAFSFGPTGGKIADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGG SGEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTLKSGEDQLGRWAFAVIADKPP QIRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADPLAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWA GGSIKLTLVATDDAGHTASSETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLA IMSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASDQEIEKAMKELREAMNQFLQE FAERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSGDRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDK LGEILRRQQEMMNDTFRMDQMQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQ LKSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGAKDMMKQMQAMQGDQGGSQEG GRQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQILEAIRKRLGNALSPDIERSYLERLLELK >Mature_867_residues TQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPDVARIGLVAAFGLAGLAALYPL RFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESSFSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAVA ALLLVTAFAFSFGPTGGKIADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGGS GEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTLKSGEDQLGRWAFAVIADKPPQ IRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADPLAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWAG GSIKLTLVATDDAGHTASSETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLAI MSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASDQEIEKAMKELREAMNQFLQEF AERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSGDRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDKL GEILRRQQEMMNDTFRMDQMQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQL KSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGAKDMMKQMQAMQGDQGGSQEGG RQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQILEAIRKRLGNALSPDIERSYLERLLELK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94745; Mature: 94614
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH VARIGLVAAFGLAGLAALYPLRFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHH FSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAVAALLLVTAFAFSFGPTGGKI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC ADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGG CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEEEECC SGEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTL CCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE KSGEDQLGRWAFAVIADKPPQIRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADP ECCCHHHHHEEEEEEECCCCCEEECCCCHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCC LAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWAGGSIKLTLVATDDAGHTASS CCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC ETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLA CCCEEEECCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH IMSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASD HHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH QEIEKAMKELREAMNQFLQEFAERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDKLGEILRRQQEMMNDTFRMDQ CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQ HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH LKSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHH KDMMKQMQAMQGDQGGSQEGGRQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LEAIRKRLGNALSPDIERSYLERLLELK HHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH VARIGLVAAFGLAGLAALYPLRFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHH FSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAVAALLLVTAFAFSFGPTGGKI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC ADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGG CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEEEECC SGEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTL CCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE KSGEDQLGRWAFAVIADKPPQIRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADP ECCCHHHHHEEEEEEECCCCCEEECCCCHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCC LAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWAGGSIKLTLVATDDAGHTASS CCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC ETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLA CCCEEEECCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH IMSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASD HHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH QEIEKAMKELREAMNQFLQEFAERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDKLGEILRRQQEMMNDTFRMDQ CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQ HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH LKSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHH KDMMKQMQAMQGDQGGSQEGGRQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LEAIRKRLGNALSPDIERSYLERLLELK HHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA