| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472997
Identifier: 13472997
GI number: 13472997
Start: 2798249
End: 2799520
Strand: Direct
Name: 13472997
Synonym: mlr3470
Alternate gene names: NA
Gene position: 2798249-2799520 (Clockwise)
Preceding gene: 13472996
Following gene: 13472998
Centisome position: 39.77
GC content: 64.07
Gene sequence:
>1272_bases ATGTCGGTCATCGCCTTCTCCATCCGCATCGTCAGCGCCGTCATCGCCTTCATCAGCCAGGTGCTGATGGCGCGCTGGAT GGGGTCGTTCGAATACGGCATCTTCGTGCTGGTCTGGGTGACGATGGTGATCGTCGGCAACCTCGCCTGCCTCGGCTTCC ACACCTCGGTCATCCGCTTCATCCCCGAATACCGCGAGCGCGGCCTGATGGACGAACTGCGCGGCATCGTCGTGGCCAGC CGCCTGTTCGTGCTGATCGCCTCCACCATCATCGCCGGGCTCGGCGCGCTCGGCGTCTGGCTGGCGGCACCCTGGATCGA AAACTACTACGTCATCCCGTTCATCCTCGGCGTCATCTGCCTGCCGATGATCGCGCTGTCGGACCTGTTGCAGGGCCAGG CCAGGGCGAACAGCTGGGCGCTTTTCGCCCTCTCGCCGACCTACCTGATACGGCCGGTGCTGATCCTGCTGTTCATGGCG CTGATGCTTCTCGCCGGCTACGCGGCCGATGCCAGGACGGCGATCTTCGCCTCGATCGCCGCCACCTATGTCACCACGCT CGCGCAGCTGGTCGGCGTCACCCACCGCATGGAGAGGCAGATCCCGGCCGGGCCGATGAAAGTGCATTTCGCGCAATGGT TCATCGTCTCGCTGCCGATCTTCCTGGTCGAAAGCTTCTTCTTCCTGCTCACCAATGCCGATGTGCTGATGGTCGGCGCC TATATGGATCCCAACGACGTCGCCGTCTATTTCGCCACGGTCAAGACGCTGGCGCTGGTGCATTTCGTCTATTTCGCCGT CAAGGCCGGTGTCGCCCAGCGCTATGCGCAGTTCACCCATGGCGAGCCGGAAAAGCTTGCCGTCTTCGCCCGCGAGACGG TGTCGTGGACCTTCTGGCCCTCGCTGCTGATGGCGCTGCTGGTGCTGGCGCTGGGCAAACCCATGCTGGTGCTGTTCGGC CCCGAATTCACATCGGGCTATCCGCTGCTGTTCCTGCTCGTCTTCGGCGTCGTGGCGCGCGCCGCCGTCGGCCCCTGCGA AAGCCTGCTCACCATGAGCGGCAACCAGAACATCTGCGCCGCCGTCTATGCCATGACACTGGCCTTCAACATCGGCCTTA ACGTGGTGCTGATCCCGCGTTTCGGCCTGTGGGGCGCCGCCATGGCCACCGCCTTCGCCATGATCTTCGAGGCCAGCGCG CTGTCCTTCACGGTCTGGCGCAAGCTCGGCATCGTCATGGCGATCTTCGTGCCTGCCAAAGGAGCCGCCTGA
Upstream 100 bases:
>100_bases GCGGTTCTTGCCGCAGCGTTTGGCGCTGCGCGTGGGGCCACTGCTTGGCCGCATCGACGCCGTGCTGTTCACCGCCGATG AGCGTGGCGAGGCCGGCCGC
Downstream 100 bases:
>100_bases TGGTCGCCATCCCGTTGCTCGAGGAAACCAGCGGCGGCACCGCCGGCGCCATGGTATCCGGCCTCGCCGGTCTGGCGCGC GATCCCGATCCCGCCCATAT
Product: polysaccharide biosynthesis related protein
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Associated Protein; Polysaccharide Export Related Protein; MatE Family; Exopolysaccharide Biosynthesis Protein; Multidrug/Oligosaccharidyl-Lipid/Polysaccharide Transporter; Virulence Factor MVIN Family Protein; PST Family Polysaccharide Export Protein; Polysaccharide Biosynthesis Related Protein
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSVIAFSIRIVSAVIAFISQVLMARWMGSFEYGIFVLVWVTMVIVGNLACLGFHTSVIRFIPEYRERGLMDELRGIVVAS RLFVLIASTIIAGLGALGVWLAAPWIENYYVIPFILGVICLPMIALSDLLQGQARANSWALFALSPTYLIRPVLILLFMA LMLLAGYAADARTAIFASIAATYVTTLAQLVGVTHRMERQIPAGPMKVHFAQWFIVSLPIFLVESFFFLLTNADVLMVGA YMDPNDVAVYFATVKTLALVHFVYFAVKAGVAQRYAQFTHGEPEKLAVFARETVSWTFWPSLLMALLVLALGKPMLVLFG PEFTSGYPLLFLLVFGVVARAAVGPCESLLTMSGNQNICAAVYAMTLAFNIGLNVVLIPRFGLWGAAMATAFAMIFEASA LSFTVWRKLGIVMAIFVPAKGAA
Sequences:
>Translated_423_residues MSVIAFSIRIVSAVIAFISQVLMARWMGSFEYGIFVLVWVTMVIVGNLACLGFHTSVIRFIPEYRERGLMDELRGIVVAS RLFVLIASTIIAGLGALGVWLAAPWIENYYVIPFILGVICLPMIALSDLLQGQARANSWALFALSPTYLIRPVLILLFMA LMLLAGYAADARTAIFASIAATYVTTLAQLVGVTHRMERQIPAGPMKVHFAQWFIVSLPIFLVESFFFLLTNADVLMVGA YMDPNDVAVYFATVKTLALVHFVYFAVKAGVAQRYAQFTHGEPEKLAVFARETVSWTFWPSLLMALLVLALGKPMLVLFG PEFTSGYPLLFLLVFGVVARAAVGPCESLLTMSGNQNICAAVYAMTLAFNIGLNVVLIPRFGLWGAAMATAFAMIFEASA LSFTVWRKLGIVMAIFVPAKGAA >Mature_422_residues SVIAFSIRIVSAVIAFISQVLMARWMGSFEYGIFVLVWVTMVIVGNLACLGFHTSVIRFIPEYRERGLMDELRGIVVASR LFVLIASTIIAGLGALGVWLAAPWIENYYVIPFILGVICLPMIALSDLLQGQARANSWALFALSPTYLIRPVLILLFMAL MLLAGYAADARTAIFASIAATYVTTLAQLVGVTHRMERQIPAGPMKVHFAQWFIVSLPIFLVESFFFLLTNADVLMVGAY MDPNDVAVYFATVKTLALVHFVYFAVKAGVAQRYAQFTHGEPEKLAVFARETVSWTFWPSLLMALLVLALGKPMLVLFGP EFTSGYPLLFLLVFGVVARAAVGPCESLLTMSGNQNICAAVYAMTLAFNIGLNVVLIPRFGLWGAAMATAFAMIFEASAL SFTVWRKLGIVMAIFVPAKGAA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46233; Mature: 46102
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIAFSIRIVSAVIAFISQVLMARWMGSFEYGIFVLVWVTMVIVGNLACLGFHTSVIRF CCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPEYRERGLMDELRGIVVASRLFVLIASTIIAGLGALGVWLAAPWIENYYVIPFILGVIC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHH LPMIALSDLLQGQARANSWALFALSPTYLIRPVLILLFMALMLLAGYAADARTAIFASIA HHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ATYVTTLAQLVGVTHRMERQIPAGPMKVHFAQWFIVSLPIFLVESFFFLLTNADVLMVGA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE YMDPNDVAVYFATVKTLALVHFVYFAVKAGVAQRYAQFTHGEPEKLAVFARETVSWTFWP EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH SLLMALLVLALGKPMLVLFGPEFTSGYPLLFLLVFGVVARAAVGPCESLLTMSGNQNICA HHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHH AVYAMTLAFNIGLNVVLIPRFGLWGAAMATAFAMIFEASALSFTVWRKLGIVMAIFVPAK HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GAA CCC >Mature Secondary Structure SVIAFSIRIVSAVIAFISQVLMARWMGSFEYGIFVLVWVTMVIVGNLACLGFHTSVIRF CEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPEYRERGLMDELRGIVVASRLFVLIASTIIAGLGALGVWLAAPWIENYYVIPFILGVIC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHH LPMIALSDLLQGQARANSWALFALSPTYLIRPVLILLFMALMLLAGYAADARTAIFASIA HHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ATYVTTLAQLVGVTHRMERQIPAGPMKVHFAQWFIVSLPIFLVESFFFLLTNADVLMVGA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE YMDPNDVAVYFATVKTLALVHFVYFAVKAGVAQRYAQFTHGEPEKLAVFARETVSWTFWP EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH SLLMALLVLALGKPMLVLFGPEFTSGYPLLFLLVFGVVARAAVGPCESLLTMSGNQNICA HHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHH AVYAMTLAFNIGLNVVLIPRFGLWGAAMATAFAMIFEASALSFTVWRKLGIVMAIFVPAK HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA