| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472975
Identifier: 13472975
GI number: 13472975
Start: 2778467
End: 2779036
Strand: Reverse
Name: 13472975
Synonym: mll3441
Alternate gene names: NA
Gene position: 2779036-2778467 (Counterclockwise)
Preceding gene: 13472977
Following gene: 13472974
Centisome position: 39.5
GC content: 63.86
Gene sequence:
>570_bases ATGACAGTCATGACGGCTTCGATCCTTTGGCGCAGGCTGGATGTGGAGGGCCACGATGCCTGCCTGCTGTCGCAAGCCGA TGGCGGGCACAGCCTTCGGGGACAGGCCATTTTCGTCCAGGACGGCAAGCCATGCTGCCTTGCCTATGAGGTGATTTGCG ACACCGGCTGGCGCACGCGATCGGCTCGGGTCGATGGTTTTCTCGGCCTGCGCGAGCTGCACTATGCCATTGAACGACGT GCCGACGGCGAGTGGATGCTGAACGGCGAGCCTCAGCGGGGCGTTGCCGGCCTTGTCGACGTCGACCTCGGCTTTACACC GGCATCGAACCTGCTGGCGATACGCCGGTTCGACCTCGGCATCGGGGAGACGACGCTCGCTCCAGCCGCCTACCTGAGCT TTCCAACGCTCGAGATGGTGCTTCTCGAGCAAAGCTATAGGCGTCTCGACGAGACCCGCTACGCGTATAGCGCGCCCGTG TTCGGCTATGACGAGATCCTTGGTGTCTCGCCGCACGGCTTCGTGGTCGACTATCCCGGCCTGTGGAGAACCACGGCGCG GCCAGGCTGA
Upstream 100 bases:
>100_bases AACATCCTGTCAGGGCATGTCAGCTGTCGGGTGCGGCGGTGAAACACAATTGGCGTGGCGGGCGAATGAGGGGCATCGTT TGGATTAGAGGGAGTGCGCG
Downstream 100 bases:
>100_bases CCCAGCATCGCTCGGTCTGGGAAAAGGTGGTCTATTAGGACGCCTTAACATGAAATTTACGAGGTTGGCGGTTTCCTGAA GCACGAGCGGGGATCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTVMTASILWRRLDVEGHDACLLSQADGGHSLRGQAIFVQDGKPCCLAYEVICDTGWRTRSARVDGFLGLRELHYAIERR ADGEWMLNGEPQRGVAGLVDVDLGFTPASNLLAIRRFDLGIGETTLAPAAYLSFPTLEMVLLEQSYRRLDETRYAYSAPV FGYDEILGVSPHGFVVDYPGLWRTTARPG
Sequences:
>Translated_189_residues MTVMTASILWRRLDVEGHDACLLSQADGGHSLRGQAIFVQDGKPCCLAYEVICDTGWRTRSARVDGFLGLRELHYAIERR ADGEWMLNGEPQRGVAGLVDVDLGFTPASNLLAIRRFDLGIGETTLAPAAYLSFPTLEMVLLEQSYRRLDETRYAYSAPV FGYDEILGVSPHGFVVDYPGLWRTTARPG >Mature_188_residues TVMTASILWRRLDVEGHDACLLSQADGGHSLRGQAIFVQDGKPCCLAYEVICDTGWRTRSARVDGFLGLRELHYAIERRA DGEWMLNGEPQRGVAGLVDVDLGFTPASNLLAIRRFDLGIGETTLAPAAYLSFPTLEMVLLEQSYRRLDETRYAYSAPVF GYDEILGVSPHGFVVDYPGLWRTTARPG
Specific function: Unknown
COG id: COG3554
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20956; Mature: 20825
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVMTASILWRRLDVEGHDACLLSQADGGHSLRGQAIFVQDGKPCCLAYEVICDTGWRTR CCEEEHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCC SARVDGFLGLRELHYAIERRADGEWMLNGEPQRGVAGLVDVDLGFTPASNLLAIRRFDLG CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCC IGETTLAPAAYLSFPTLEMVLLEQSYRRLDETRYAYSAPVFGYDEILGVSPHGFVVDYPG CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCCCEEEECCC LWRTTARPG CCCCCCCCC >Mature Secondary Structure TVMTASILWRRLDVEGHDACLLSQADGGHSLRGQAIFVQDGKPCCLAYEVICDTGWRTR CEEEHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCC SARVDGFLGLRELHYAIERRADGEWMLNGEPQRGVAGLVDVDLGFTPASNLLAIRRFDLG CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCC IGETTLAPAAYLSFPTLEMVLLEQSYRRLDETRYAYSAPVFGYDEILGVSPHGFVVDYPG CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCCCEEEECCC LWRTTARPG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA