Click here to switch to the map view.

The map label for this gene is ynhG [C]

Identifier: 13472965

GI number: 13472965

Start: 2764101

End: 2765618

Strand: Reverse

Name: ynhG [C]

Synonym: mll3427

Alternate gene names: 13472965

Gene position: 2765618-2764101 (Counterclockwise)

Preceding gene: 13472966

Following gene: 13472963

Centisome position: 39.31

GC content: 64.36

Gene sequence:

>1518_bases
ATGTTCCGCACGATCTTTGCCCTTTCGGCACTCGCCACCGGGCTCGTGTCCTTCGGTGCGCTTGGCGCGCCGACGCAGGA
TAACGCCCCAAGGGTTGTCCGCACTGCCAATGACGGCGGCATTCTTGTCGCCCAGGACGGAAATCTGGACATCTACTACG
ACGCCCGTGGCAACCGCGTCATCGTCGATGCCGACACCGGCAAGGTCATCGCCATCCAGCCGCCGCAGACACGGCTTGAC
CGGCGCGCGCTGCGCCGCGAGACAAGGCTGCGCGAATTGGGCCGTGCCCCAGCCGACGATGACCGCTACTATCTCGACGA
TCCGCAAGACATGGCGCGGTTCCGTCGCAAGCAGTTGGAAGAGGAGGGCAGGGTCATCCCGCCGCCGGCGGATGAATACG
ACCCCAATGGCGACAATTCGGTGGAAGCCTATCCGCCGGCGCCGCAGGACGACGGCAGCTACGACAACAGCTATCCCGAT
GCGCCACAGCCGGCAAAGCCGGGCACCATCAAGCGCCAGCCGCTGAACGAGGCCGCGATAGACCCTGCGCAGCCGGACTT
AGAGCAGGTGAATCCGGATACGCAGGCTTCCCTGCCGCCGGACACTGGCGGCAAGGCCGCCGTCGATCCGTCGCTGTCGC
TCGGCGTGCGCCAGGACGTGGCGGCGCTGCAGGTGCTGCTCGACCGCGGCGGCGCTTCGCCGGGCGTGATCGACGGGCGT
TTCGGCTCAAATGTCGATAAGGCCCTGGCCGCCTATAACCAGATCACCGGCAGCAATCTGAAATCGACGGACACAGTCGG
CATCCAGGCGGCGCTCGCGCAATCGGGCGGCGATGCTTTCGCCAGTTACACCATTACAGCGGAAGATGCGGCTGGCCCCT
ATGTTGCCTCGATCCCGGAAGACTACGGCCAGAAGGCGCAGCTCAACTGCATGTGCTACATCTCCGTCACCGAGGCGCTC
GCCGAGCGCTTCCACATGGACGAGAACTATCTGAAGTCGATCAACAAGGGTCTCGACTTCAATCGCCCCGGCACGATCAT
CAAGGTCGCCAATTTCGGCAAGCTGGTTTCGACGCCGGTCGCGCGCATCGTCGCCGACAAGACGAAGAAAGAAGTGTACG
CCTACGATGCGAGCGGCAAGCTGGTCGCAGCCTATCCCGCCACCATCGGCTCGGCGGATACGCCGTCGCCCACCGGCATC
CACGCCGTGTCGCGCATCGCGCTCGACCCGAACTACACCTACAACCCGAACATCAATTTCAAGCAGGGCCAGAACGACAA
GATCCTGACCATTCCGCCAGGCCCCAACGGCCCGGTCGGCTCGGTGTGGATCGCCCTGGACAAGCCGACTTACGGCATCC
ACGGAACGCCCGAGCCCTCGAAGATCGGCAAGACCGAAAGCCATGGCTGCGTTCGCCTGACGAACTGGGACGCGCGCGAA
CTTGCCAAGCTGGTGTCGCCGGGCGTCACCGTGGAGTTCGTCGGCGGACCGTCAGCCGATGACTTTGCGCAGCAATGA

Upstream 100 bases:

>100_bases
ATAATGGAACCATAGGGTGAGGTAACTGGTTTGCTGGCGAAGGGGTTCGCCCAGAGAACAATGCCGGCGGCGGCAATTAC
GGACCGGAGAGTTGGCCACG

Downstream 100 bases:

>100_bases
GCCGCGCAGCGCGGTGGCATAGATCAGCTGCACCACCAGAATGAAGCCGACGCTGAGCAACGGCGTGATCAGGCAGAGCA
GCGCACCGATCGCCCACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MFRTIFALSALATGLVSFGALGAPTQDNAPRVVRTANDGGILVAQDGNLDIYYDARGNRVIVDADTGKVIAIQPPQTRLD
RRALRRETRLRELGRAPADDDRYYLDDPQDMARFRRKQLEEEGRVIPPPADEYDPNGDNSVEAYPPAPQDDGSYDNSYPD
APQPAKPGTIKRQPLNEAAIDPAQPDLEQVNPDTQASLPPDTGGKAAVDPSLSLGVRQDVAALQVLLDRGGASPGVIDGR
FGSNVDKALAAYNQITGSNLKSTDTVGIQAALAQSGGDAFASYTITAEDAAGPYVASIPEDYGQKAQLNCMCYISVTEAL
AERFHMDENYLKSINKGLDFNRPGTIIKVANFGKLVSTPVARIVADKTKKEVYAYDASGKLVAAYPATIGSADTPSPTGI
HAVSRIALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKTESHGCVRLTNWDARE
LAKLVSPGVTVEFVGGPSADDFAQQ

Sequences:

>Translated_505_residues
MFRTIFALSALATGLVSFGALGAPTQDNAPRVVRTANDGGILVAQDGNLDIYYDARGNRVIVDADTGKVIAIQPPQTRLD
RRALRRETRLRELGRAPADDDRYYLDDPQDMARFRRKQLEEEGRVIPPPADEYDPNGDNSVEAYPPAPQDDGSYDNSYPD
APQPAKPGTIKRQPLNEAAIDPAQPDLEQVNPDTQASLPPDTGGKAAVDPSLSLGVRQDVAALQVLLDRGGASPGVIDGR
FGSNVDKALAAYNQITGSNLKSTDTVGIQAALAQSGGDAFASYTITAEDAAGPYVASIPEDYGQKAQLNCMCYISVTEAL
AERFHMDENYLKSINKGLDFNRPGTIIKVANFGKLVSTPVARIVADKTKKEVYAYDASGKLVAAYPATIGSADTPSPTGI
HAVSRIALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKTESHGCVRLTNWDARE
LAKLVSPGVTVEFVGGPSADDFAQQ
>Mature_505_residues
MFRTIFALSALATGLVSFGALGAPTQDNAPRVVRTANDGGILVAQDGNLDIYYDARGNRVIVDADTGKVIAIQPPQTRLD
RRALRRETRLRELGRAPADDDRYYLDDPQDMARFRRKQLEEEGRVIPPPADEYDPNGDNSVEAYPPAPQDDGSYDNSYPD
APQPAKPGTIKRQPLNEAAIDPAQPDLEQVNPDTQASLPPDTGGKAAVDPSLSLGVRQDVAALQVLLDRGGASPGVIDGR
FGSNVDKALAAYNQITGSNLKSTDTVGIQAALAQSGGDAFASYTITAEDAAGPYVASIPEDYGQKAQLNCMCYISVTEAL
AERFHMDENYLKSINKGLDFNRPGTIIKVANFGKLVSTPVARIVADKTKKEVYAYDASGKLVAAYPATIGSADTPSPTGI
HAVSRIALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKTESHGCVRLTNWDARE
LAKLVSPGVTVEFVGGPSADDFAQQ

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: COG3409

COG function: function code M; Putative peptidoglycan-binding domain-containing protein

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=187, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787356, Length=188, Percent_Identity=28.7234042553192, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 53949; Mature: 53949

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTIFALSALATGLVSFGALGAPTQDNAPRVVRTANDGGILVAQDGNLDIYYDARGNRV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCCEEEEEECCCCEE
IVDADTGKVIAIQPPQTRLDRRALRRETRLRELGRAPADDDRYYLDDPQDMARFRRKQLE
EEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHH
EEGRVIPPPADEYDPNGDNSVEAYPPAPQDDGSYDNSYPDAPQPAKPGTIKRQPLNEAAI
HCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
DPAQPDLEQVNPDTQASLPPDTGGKAAVDPSLSLGVRQDVAALQVLLDRGGASPGVIDGR
CCCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC
FGSNVDKALAAYNQITGSNLKSTDTVGIQAALAQSGGDAFASYTITAEDAAGPYVASIPE
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCEEECCCH
DYGQKAQLNCMCYISVTEALAERFHMDENYLKSINKGLDFNRPGTIIKVANFGKLVSTPV
HHCCCCEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHH
ARIVADKTKKEVYAYDASGKLVAAYPATIGSADTPSPTGIHAVSRIALDPNYTYNPNINF
HHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHEEEEEECCCCEECCCCCC
KQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKTESHGCVRLTNWDARE
CCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEECCCCHHH
LAKLVSPGVTVEFVGGPSADDFAQQ
HHHHHCCCCEEEECCCCCCHHHHCC
>Mature Secondary Structure
MFRTIFALSALATGLVSFGALGAPTQDNAPRVVRTANDGGILVAQDGNLDIYYDARGNRV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCCEEEEEECCCCEE
IVDADTGKVIAIQPPQTRLDRRALRRETRLRELGRAPADDDRYYLDDPQDMARFRRKQLE
EEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHH
EEGRVIPPPADEYDPNGDNSVEAYPPAPQDDGSYDNSYPDAPQPAKPGTIKRQPLNEAAI
HCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
DPAQPDLEQVNPDTQASLPPDTGGKAAVDPSLSLGVRQDVAALQVLLDRGGASPGVIDGR
CCCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC
FGSNVDKALAAYNQITGSNLKSTDTVGIQAALAQSGGDAFASYTITAEDAAGPYVASIPE
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCEEECCCH
DYGQKAQLNCMCYISVTEALAERFHMDENYLKSINKGLDFNRPGTIIKVANFGKLVSTPV
HHCCCCEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHH
ARIVADKTKKEVYAYDASGKLVAAYPATIGSADTPSPTGIHAVSRIALDPNYTYNPNINF
HHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHEEEEEECCCCEECCCCCC
KQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKTESHGCVRLTNWDARE
CCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEECCCCHHH
LAKLVSPGVTVEFVGGPSADDFAQQ
HHHHHCCCCEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA