| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472947
Identifier: 13472947
GI number: 13472947
Start: 2733871
End: 2734377
Strand: Direct
Name: 13472947
Synonym: mlr3402
Alternate gene names: NA
Gene position: 2733871-2734377 (Clockwise)
Preceding gene: 13472946
Following gene: 13472952
Centisome position: 38.86
GC content: 67.65
Gene sequence:
>507_bases ATGACCGACCCCGAAGCCAGAGCCGAAAAGCTGTCGCGTGAACTCGATTCCGCCTTCCGCAACCGCGCCGATCTCTACCG CCTGTTCCTCGAGGAACTGACCGAAGAGCTGGGTTCTGACAAGGCGGAGGCGATCATGATCCGCGCCATCGAGCAGCGCG GCAAGGAAGTGGCGGCAGCCGCCTTCGCCAGCTTCGGCGCCAACGATGCGCGCGCCATCGGCGAAGCCTTCCTGGCGGTC AGCCCGGATGGCGGCCTGATGTATCCGACCGACGTCGAACGCGGCGATGACCGCATCGCCTTCAAGGTCAAGCGCTGCCC GCTGAAGGACGCCTGGGTCGAGGCCGGCGTCGGCGACGAAAAGCTCGCCACGCTCTGCCGCATCGCCGGCGCCTTCGACC GCGGCCTGTTCGAGGCGACCGGCGTGCGCTTCGACAATGTCACCTGGACGCCCGGCCACGGCTCCGGCTGCTGTCACATC GCGCTGACCAACCGCGATGCCGGCTAG
Upstream 100 bases:
>100_bases ACGGCGGTGCCCGTGTCGTCATCGACGCACCGCAATCGGCCATCGGCAAGGCCCTAGTGGCGGCCGCACCGAGGCTCGAC AGAACCCTACAGGATCCATC
Downstream 100 bases:
>100_bases GTAATTCACACCTTAGCCGCCGACCATCAGCTTGACGACCTCGTCATGGTTGGTCTCGGAAATCTTGCGCTCGCCGGCCT GGATGCCACGCCGCAGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTDPEARAEKLSRELDSAFRNRADLYRLFLEELTEELGSDKAEAIMIRAIEQRGKEVAAAAFASFGANDARAIGEAFLAV SPDGGLMYPTDVERGDDRIAFKVKRCPLKDAWVEAGVGDEKLATLCRIAGAFDRGLFEATGVRFDNVTWTPGHGSGCCHI ALTNRDAG
Sequences:
>Translated_168_residues MTDPEARAEKLSRELDSAFRNRADLYRLFLEELTEELGSDKAEAIMIRAIEQRGKEVAAAAFASFGANDARAIGEAFLAV SPDGGLMYPTDVERGDDRIAFKVKRCPLKDAWVEAGVGDEKLATLCRIAGAFDRGLFEATGVRFDNVTWTPGHGSGCCHI ALTNRDAG >Mature_167_residues TDPEARAEKLSRELDSAFRNRADLYRLFLEELTEELGSDKAEAIMIRAIEQRGKEVAAAAFASFGANDARAIGEAFLAVS PDGGLMYPTDVERGDDRIAFKVKRCPLKDAWVEAGVGDEKLATLCRIAGAFDRGLFEATGVRFDNVTWTPGHGSGCCHIA LTNRDAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18242; Mature: 18110
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPEARAEKLSRELDSAFRNRADLYRLFLEELTEELGSDKAEAIMIRAIEQRGKEVAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AFASFGANDARAIGEAFLAVSPDGGLMYPTDVERGDDRIAFKVKRCPLKDAWVEAGVGDE HHHHCCCCHHHHHHHHHEEECCCCCEECCCCCCCCCCEEEEEEECCCCHHHHHHCCCCHH KLATLCRIAGAFDRGLFEATGVRFDNVTWTPGHGSGCCHIALTNRDAG HHHHHHHHHHHHHHHHHHHCCEEECCEEECCCCCCCEEEEEECCCCCC >Mature Secondary Structure TDPEARAEKLSRELDSAFRNRADLYRLFLEELTEELGSDKAEAIMIRAIEQRGKEVAAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AFASFGANDARAIGEAFLAVSPDGGLMYPTDVERGDDRIAFKVKRCPLKDAWVEAGVGDE HHHHCCCCHHHHHHHHHEEECCCCCEECCCCCCCCCCEEEEEEECCCCHHHHHHCCCCHH KLATLCRIAGAFDRGLFEATGVRFDNVTWTPGHGSGCCHIALTNRDAG HHHHHHHHHHHHHHHHHHHCCEEECCEEECCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA