| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472911
Identifier: 13472911
GI number: 13472911
Start: 2698610
End: 2700082
Strand: Direct
Name: 13472911
Synonym: mlr3359
Alternate gene names: NA
Gene position: 2698610-2700082 (Clockwise)
Preceding gene: 13472910
Following gene: 13472912
Centisome position: 38.35
GC content: 62.32
Gene sequence:
>1473_bases ATGGCGACCTTGACCGCCGAAGAGGTATTGTCGATCGAGGAGCGCTATCCGCAAGTGTTCCGGCGGCCGCTGTACAAACG CTTCGCTCCGCTGTTCCTGTTCGTCGGCATCCTGACCTATCTCATCTATGTCCTGTGGTTCTTCAGCCTGCCGCAGGTGC TGCGGGAATCGCACTGGGAACGTCTGCCGCTGTTCCTGACACAATGGATCAGCTACGACCTGCAGCCGGAATTCCGCCTC GACCAGCCTGAGATCACGCCAAAATACCCCCGCTTTTCCGCGCTTGGCGAGAACCCGAACCCCGACTGGGTGATCAGAAA CCCGGACGGCACCTTCACCGTGCTGATCGATGGTCCGGCAAAATCCGTCACCTTCGACAAGGCGCAGGCAACGATCGTAG CCAACGGCCAGACCGTGCCGGTTTCGCTGACAAGCGGCAAGCCGTTGATATCAGGCCCGGTGCCGGACTGGATCACCGCG CATGACGACGAGGTGGTCGCCAAGATGGGTTTTGTCGGTGAGGTGCGCGTAACCGCCGATCGCGTCAAAGTGCGCAAGCG TTTCCTCGGCTGGGCGAATTTCGTCTTCGACACACGCTCGCCCTTCTTCGGCAAATCGGCGGGAGAGGTGATCTCGCTGA TCGTGTCCGGGCCCGAACTGAAGCCGGGCACCTCGAACCTGGCGCTGGCCGGCGACAACATCTGGAACAACGCTCAGTGG CAGCACGGCGACGTCTGGACAAAGCTGCTGCAGACCATCGTCATGGCGTTCCTGGGCACGCTGCTTGGCGGCATCGTCGC CTTCCCGCTTGCCTTTTTTCTCCGCCCGCAACATCACGCCGAGCGGCGTGCTCAGCCAGGTCCTGAAACGCTTCTTCGAC TTCATGCGCTCGGTCGACATGCTGATCTGGGCGCTGTTCTTCACCCGCGCCTTTGGCCCCGGTCCGCTTGCGGGCAGTGC CGCGATCTTCTTCACCGAGATCGGTACGCTCGGCAAAACCTACTCCGAGGCGCTGGAGAACATCGACGACAAGCCGCGCG AAGGTGTGCTGTCGACCGGCGCCAACGGCCTCCTGGTGCAGCGCTATGGCGTCATGCCGGAAGTCATCCCGGTCTTCATC AGCCAGACGCTCTACCAGTGGGAATCCAACACCCGCGGCGCCACCATCATCGGCGCCGTCGGCGCCGGCGGCATCGGCCT GAAACTGTGGGAAGCGATGCGCACCAATTCCAACTGGGCCAACGTCTTCTACATGGTGCTGCTGATCCTGCTGGTCGTCT TCATCTTCGACAACATCTCGAACTTCCTGCGCCGCCGGCTGAGCCGGACGATTCACGACTACAACAGGATCCAGGCCGAG CAGGGGTGATGCACTCCGCTCCAGGATCGACAGCGGCTCACCGCGCCTTCGTCATCCACGGGCGGAGCAAGGAGCGAAGC GACGCGGCGCAGACCCGAGGATCCATTCCGTGA
Upstream 100 bases:
>100_bases GCTGCTCTTGTTCACGACCATCTTCATCATCGACCAGTTCTCCGCCTGGCTGCGCCGCAAGCTGGTCGGCGAGCAGGCCT TTATGATGGGAGCGTGAACC
Downstream 100 bases:
>100_bases CGTCTGGGCTAGAATGCAACGGTGCAAAAAAGGCCTCCATTCGCATCCCTGTCAGCACCGCTGCGGCGCTCGAATGTCGC GGCATGGATCCTCGGGTCTC
Product: phosphonate ABC transporter (permease), frameshift F3->F1 at 272-285 aa
Products: NA
Alternate protein names: Phosphonate Uptake Transporter; Phosphonate ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Spanning Protein; Phosphonate ABC Transporter Permease; Phosphate Uptake ABC Transporter Permease Protein; Phosphonate ABC Transporter Permease PhnE; Phosphonate ABC Transporter Frameshift F3-_F1 At
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MATLTAEEVLSIEERYPQVFRRPLYKRFAPLFLFVGILTYLIYVLWFFSLPQVLRESHWERLPLFLTQWISYDLQPEFRL DQPEITPKYPRFSALGENPNPDWVIRNPDGTFTVLIDGPAKSVTFDKAQATIVANGQTVPVSLTSGKPLISGPVPDWITA HDDEVVAKMGFVGEVRVTADRVKVRKRFLGWANFVFDTRSPFFGKSAGEVISLIVSGPELKPGTSNLALAGDNIWNNAQW QHGDVWTKLLQTIVMAFLGTLLGGIVAFPLAFFLRPQHHAERRAQPGPETLLRLHALGRHADLGAVLHPRLWPRSACGQC RDLLHRDRYARQNLLRGAGEHRRQAARRCAVDRRQRPPGAALWRHAGSHPGLHQPDALPVGIQHPRRHHHRRRRRRRHRP ETVGSDAHQFQLGQRLLHGAADPAGRLHLRQHLELPAPPAEPDDSRLQQDPGRAGVMHSAPGSTAAHRAFVIHGRSKERS DAAQTRGSIP
Sequences:
>Translated_490_residues MATLTAEEVLSIEERYPQVFRRPLYKRFAPLFLFVGILTYLIYVLWFFSLPQVLRESHWERLPLFLTQWISYDLQPEFRL DQPEITPKYPRFSALGENPNPDWVIRNPDGTFTVLIDGPAKSVTFDKAQATIVANGQTVPVSLTSGKPLISGPVPDWITA HDDEVVAKMGFVGEVRVTADRVKVRKRFLGWANFVFDTRSPFFGKSAGEVISLIVSGPELKPGTSNLALAGDNIWNNAQW QHGDVWTKLLQTIVMAFLGTLLGGIVAFPLAFFLRPQHHAERRAQPGPETLLRLHALGRHADLGAVLHPRLWPRSACGQC RDLLHRDRYARQNLLRGAGEHRRQAARRCAVDRRQRPPGAALWRHAGSHPGLHQPDALPVGIQHPRRHHHRRRRRRRHRP ETVGSDAHQFQLGQRLLHGAADPAGRLHLRQHLELPAPPAEPDDSRLQQDPGRAGVMHSAPGSTAAHRAFVIHGRSKERS DAAQTRGSIP >Mature_489_residues ATLTAEEVLSIEERYPQVFRRPLYKRFAPLFLFVGILTYLIYVLWFFSLPQVLRESHWERLPLFLTQWISYDLQPEFRLD QPEITPKYPRFSALGENPNPDWVIRNPDGTFTVLIDGPAKSVTFDKAQATIVANGQTVPVSLTSGKPLISGPVPDWITAH DDEVVAKMGFVGEVRVTADRVKVRKRFLGWANFVFDTRSPFFGKSAGEVISLIVSGPELKPGTSNLALAGDNIWNNAQWQ HGDVWTKLLQTIVMAFLGTLLGGIVAFPLAFFLRPQHHAERRAQPGPETLLRLHALGRHADLGAVLHPRLWPRSACGQCR DLLHRDRYARQNLLRGAGEHRRQAARRCAVDRRQRPPGAALWRHAGSHPGLHQPDALPVGIQHPRRHHHRRRRRRRHRPE TVGSDAHQFQLGQRLLHGAADPAGRLHLRQHLELPAPPAEPDDSRLQQDPGRAGVMHSAPGSTAAHRAFVIHGRSKERSD AAQTRGSIP
Specific function: Unknown
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55187; Mature: 55056
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLTAEEVLSIEERYPQVFRRPLYKRFAPLFLFVGILTYLIYVLWFFSLPQVLRESHWE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLPLFLTQWISYDLQPEFRLDQPEITPKYPRFSALGENPNPDWVIRNPDGTFTVLIDGPA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCC KSVTFDKAQATIVANGQTVPVSLTSGKPLISGPVPDWITAHDDEVVAKMGFVGEVRVTAD CCCEECCCCEEEEECCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHCCCCEEEEHHH RVKVRKRFLGWANFVFDTRSPFFGKSAGEVISLIVSGPELKPGTSNLALAGDNIWNNAQW HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCC QHGDVWTKLLQTIVMAFLGTLLGGIVAFPLAFFLRPQHHAERRAQPGPETLLRLHALGRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCC ADLGAVLHPRLWPRSACGQCRDLLHRDRYARQNLLRGAGEHRRQAARRCAVDRRQRPPGA CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH ALWRHAGSHPGLHQPDALPVGIQHPRRHHHRRRRRRRHRPETVGSDAHQFQLGQRLLHGA HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC ADPAGRLHLRQHLELPAPPAEPDDSRLQQDPGRAGVMHSAPGSTAAHRAFVIHGRSKERS CCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCHHCEEEEEECCCCCHH DAAQTRGSIP HHHHHCCCCC >Mature Secondary Structure ATLTAEEVLSIEERYPQVFRRPLYKRFAPLFLFVGILTYLIYVLWFFSLPQVLRESHWE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLPLFLTQWISYDLQPEFRLDQPEITPKYPRFSALGENPNPDWVIRNPDGTFTVLIDGPA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCC KSVTFDKAQATIVANGQTVPVSLTSGKPLISGPVPDWITAHDDEVVAKMGFVGEVRVTAD CCCEECCCCEEEEECCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHCCCCEEEEHHH RVKVRKRFLGWANFVFDTRSPFFGKSAGEVISLIVSGPELKPGTSNLALAGDNIWNNAQW HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCC QHGDVWTKLLQTIVMAFLGTLLGGIVAFPLAFFLRPQHHAERRAQPGPETLLRLHALGRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCC ADLGAVLHPRLWPRSACGQCRDLLHRDRYARQNLLRGAGEHRRQAARRCAVDRRQRPPGA CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH ALWRHAGSHPGLHQPDALPVGIQHPRRHHHRRRRRRRHRPETVGSDAHQFQLGQRLLHGA HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC ADPAGRLHLRQHLELPAPPAEPDDSRLQQDPGRAGVMHSAPGSTAAHRAFVIHGRSKERS CCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCHHCEEEEEECCCCCHH DAAQTRGSIP HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA