| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472872
Identifier: 13472872
GI number: 13472872
Start: 2655055
End: 2655762
Strand: Direct
Name: 13472872
Synonym: mlr3302
Alternate gene names: NA
Gene position: 2655055-2655762 (Clockwise)
Preceding gene: 13472871
Following gene: 13472873
Centisome position: 37.73
GC content: 60.03
Gene sequence:
>708_bases ATGAAGAAGCCGGGGGGCACGACAAAGCAGACACCGGTAGCCGCACCCGCAAAGGCGCCAGCAACGAAGGAGACGCTGCC GGAAACCACCGAAGGTTTTCCCTGGCCTAGCAGCCATGAGATCAAGAAGGAGAGCAATCCCTTCACCGATCGCGACTGGC GCATGCTGGTCTATGCCTGGTCAGGCTTGCTGGTGCGTTTCGCCATCATCTTCACCCTGGCATTCTCGGTCTACCAGTTC CTGGCCAACCAGGAGCAGAAGCGCGTCGAGCAGACAATGTCCCTGGTCGAGCTCTGGGAAACCAAGGACTACCAGCAGGC ACAACGGGCGTTGAAAGATCGTCTTGCCGCCCTCAACGCCAAATACGACAATCTGCTCAGCGCCAACCCCTCGCCGACCG AGGAACAGGTGTTCCGCCAGCGCATCGGCATCGAGGCGATGAGCACCTCCGGCGGCGACATGCCGCTCGCCGACTTCAGC GAGAATTTCGACCGCATCGTCTATTTCCTCAACCGGCTGTCCTTCTGCGTCGATGGCAACCTGTGCTCGCGCAAGGTCAC CGATGCCTATTTCCGCGACTACGCCGTCTCGTTCTGGAGTTATTTTGCCGGCTATGTCGACAAGCAGCGCAAGGCGGGTT CACCGACTTTTGCCACGGCGATCGAGGCCTATGTTCGCAACGGGCAACCAGGCGGCGAAGCCAGATAG
Upstream 100 bases:
>100_bases TCATTGTTTCGCGCCCGCAACTGGCATGCCTGAAAAAGCAGCTTGAAGCGCCGGGCGTAGTGCTCGATCCCTCCGCCACC ATCGAACTGGACAGCTGCAA
Downstream 100 bases:
>100_bases CGATGGGGAAACCCGGAACCACCTTCCGCCTCATGCGTGCCAGCCGCTGGCTGGCCATGGCTGGAGCCTTGATCACGGCC TCGGCCGCCTGCGCCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKKPGGTTKQTPVAAPAKAPATKETLPETTEGFPWPSSHEIKKESNPFTDRDWRMLVYAWSGLLVRFAIIFTLAFSVYQF LANQEQKRVEQTMSLVELWETKDYQQAQRALKDRLAALNAKYDNLLSANPSPTEEQVFRQRIGIEAMSTSGGDMPLADFS ENFDRIVYFLNRLSFCVDGNLCSRKVTDAYFRDYAVSFWSYFAGYVDKQRKAGSPTFATAIEAYVRNGQPGGEAR
Sequences:
>Translated_235_residues MKKPGGTTKQTPVAAPAKAPATKETLPETTEGFPWPSSHEIKKESNPFTDRDWRMLVYAWSGLLVRFAIIFTLAFSVYQF LANQEQKRVEQTMSLVELWETKDYQQAQRALKDRLAALNAKYDNLLSANPSPTEEQVFRQRIGIEAMSTSGGDMPLADFS ENFDRIVYFLNRLSFCVDGNLCSRKVTDAYFRDYAVSFWSYFAGYVDKQRKAGSPTFATAIEAYVRNGQPGGEAR >Mature_235_residues MKKPGGTTKQTPVAAPAKAPATKETLPETTEGFPWPSSHEIKKESNPFTDRDWRMLVYAWSGLLVRFAIIFTLAFSVYQF LANQEQKRVEQTMSLVELWETKDYQQAQRALKDRLAALNAKYDNLLSANPSPTEEQVFRQRIGIEAMSTSGGDMPLADFS ENFDRIVYFLNRLSFCVDGNLCSRKVTDAYFRDYAVSFWSYFAGYVDKQRKAGSPTFATAIEAYVRNGQPGGEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26604; Mature: 26604
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPGGTTKQTPVAAPAKAPATKETLPETTEGFPWPSSHEIKKESNPFTDRDWRMLVYAW CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SGLLVRFAIIFTLAFSVYQFLANQEQKRVEQTMSLVELWETKDYQQAQRALKDRLAALNA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KYDNLLSANPSPTEEQVFRQRIGIEAMSTSGGDMPLADFSENFDRIVYFLNRLSFCVDGN HHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LCSRKVTDAYFRDYAVSFWSYFAGYVDKQRKAGSPTFATAIEAYVRNGQPGGEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKPGGTTKQTPVAAPAKAPATKETLPETTEGFPWPSSHEIKKESNPFTDRDWRMLVYAW CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SGLLVRFAIIFTLAFSVYQFLANQEQKRVEQTMSLVELWETKDYQQAQRALKDRLAALNA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KYDNLLSANPSPTEEQVFRQRIGIEAMSTSGGDMPLADFSENFDRIVYFLNRLSFCVDGN HHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LCSRKVTDAYFRDYAVSFWSYFAGYVDKQRKAGSPTFATAIEAYVRNGQPGGEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA