Click here to switch to the map view.

The map label for this gene is 13472864

Identifier: 13472864

GI number: 13472864

Start: 2645378

End: 2645632

Strand: Reverse

Name: 13472864

Synonym: msl3293

Alternate gene names: NA

Gene position: 2645632-2645378 (Counterclockwise)

Preceding gene: 13472865

Following gene: 13472863

Centisome position: 37.6

GC content: 61.18

Gene sequence:

>255_bases
ATGGGTGTCGAAAGCCTTCTCGTCTTCATCATCATCGGTGCCATTGCCGGCTGGCTCGCCGGTCTCATCGTCTCGGGTTT
CGGCTTCGGCCTCATCGGCAACATCATCGTCGGCATCGTCGGCGCGTTCATCGCCGGCTGGCTGTTGCCGCGGATCGGTT
TCTCCATCGGCGGCGGCGTCATTGCTTCCATCATCCACGCCACGATCGGCGCCATCATCCTTCTGGTGCTGGTCAAGGTG
CTGAAACGAGCCTGA

Upstream 100 bases:

>100_bases
GGCGGGGCCAGCTGCTTTCGAATAGCCTGAAGCCGTTGATATCGGGGCCGATTCGGAGCCTTCCGCTCCGCGCTCGCCCT
CTGCTCGGAGGAAAATCGCC

Downstream 100 bases:

>100_bases
GGCTCGAGACGACAAGGGGCGCGCCATGAAGCAGAATACGCTCTATCTCATCATTGGCGCGCTCGTCGTCGTGGTCATCG
CGCTTGGCGTCTATGTCTAC

Product: transglycosylase associated gene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MGVESLLVFIIIGAIAGWLAGLIVSGFGFGLIGNIIVGIVGAFIAGWLLPRIGFSIGGGVIASIIHATIGAIILLVLVKV
LKRA

Sequences:

>Translated_84_residues
MGVESLLVFIIIGAIAGWLAGLIVSGFGFGLIGNIIVGIVGAFIAGWLLPRIGFSIGGGVIASIIHATIGAIILLVLVKV
LKRA
>Mature_83_residues
GVESLLVFIIIGAIAGWLAGLIVSGFGFGLIGNIIVGIVGAFIAGWLLPRIGFSIGGGVIASIIHATIGAIILLVLVKVL
KRA

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8480; Mature: 8348

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVESLLVFIIIGAIAGWLAGLIVSGFGFGLIGNIIVGIVGAFIAGWLLPRIGFSIGGGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASIIHATIGAIILLVLVKVLKRA
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVESLLVFIIIGAIAGWLAGLIVSGFGFGLIGNIIVGIVGAFIAGWLLPRIGFSIGGGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASIIHATIGAIILLVLVKVLKRA
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA