| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472854
Identifier: 13472854
GI number: 13472854
Start: 2631003
End: 2631758
Strand: Direct
Name: 13472854
Synonym: mlr3278
Alternate gene names: NA
Gene position: 2631003-2631758 (Clockwise)
Preceding gene: 13472853
Following gene: 13472856
Centisome position: 37.39
GC content: 60.98
Gene sequence:
>756_bases ATGCGCCCAGCACGGGCTCGACCCGGAAGCGCTTGTGGTGCTGCCTTTTCTCGATTAGCCGGGTGGGAGGTTGAAATGTC CGCGCCTAGTGACTTGGTACCACTTCAACCGGGCGACCGCGCACCGAACGTGATACTCGACGCCATTACCCAGGAAGGCA AGATCGCGCTTGACGACTTTCGCGGTCAAAAGCCGGTGCTGGTCGGGCTGTTTCGAGGTCTGCATTGTGCGTTTTGCCGG CGCCATATCGCCGCCCAGGCGCGGCTTGATCCGGCGTTGCGCGAAAAGGGCGTGGAGAGCCTGACGGTGGTCAACACGCC GATCGAGCGGGCGCGTCTCTATTTCCGCTACCACCCGATGCCGAATCTGCTTGCGGCCTCCGACCCTGAACGCGCTTCAC ATCGTGCCTTTGGACTGCCCAATCTCGAATTCACCCAAGACGAAACAAACTGGCCGTACAAGGTCTCGATGGCAGCGGCA AAGGGTATGCGGGTCGACATGCCAGGCGAGTTACCCGGTCCAATGGATCCTTTTGCGGCCGGCGAAATCCTTGACAAGAA GGACCCTTACGAACTGACCGAGGCCGACGAGCAGATGATGGCAACAGGACACGGACAACTGGTCGGTCAGTTCCTGCTAG ACCGGCAGGGGATCGTCCGCTGGAGCTTCACGGAGGTTCCAGAGGGTGGGCGATACATGTTTGGGGCGCCAAGCCCGCAG GAGCTGATGTCGGCCGTGTCGCAAGTCGCCCAATAG
Upstream 100 bases:
>100_bases CCCAACTTCTGTTTCCGTGCTATGATGGTCTTGCAACGCTTAATCTCGACCTCGACAATCTGGCCGAGGCCGAACGTTAC TTTTCCTTGGCGCAGGGTAT
Downstream 100 bases:
>100_bases ACAAGTTCACCGCTCCTTGAGCACGGCCTCGACAGTGGCAACAAAGTCATCGAGCGAGCGATCCCCGCGAATCTCGATGC GCGGAAGGTCGATGAGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MRPARARPGSACGAAFSRLAGWEVEMSAPSDLVPLQPGDRAPNVILDAITQEGKIALDDFRGQKPVLVGLFRGLHCAFCR RHIAAQARLDPALREKGVESLTVVNTPIERARLYFRYHPMPNLLAASDPERASHRAFGLPNLEFTQDETNWPYKVSMAAA KGMRVDMPGELPGPMDPFAAGEILDKKDPYELTEADEQMMATGHGQLVGQFLLDRQGIVRWSFTEVPEGGRYMFGAPSPQ ELMSAVSQVAQ
Sequences:
>Translated_251_residues MRPARARPGSACGAAFSRLAGWEVEMSAPSDLVPLQPGDRAPNVILDAITQEGKIALDDFRGQKPVLVGLFRGLHCAFCR RHIAAQARLDPALREKGVESLTVVNTPIERARLYFRYHPMPNLLAASDPERASHRAFGLPNLEFTQDETNWPYKVSMAAA KGMRVDMPGELPGPMDPFAAGEILDKKDPYELTEADEQMMATGHGQLVGQFLLDRQGIVRWSFTEVPEGGRYMFGAPSPQ ELMSAVSQVAQ >Mature_251_residues MRPARARPGSACGAAFSRLAGWEVEMSAPSDLVPLQPGDRAPNVILDAITQEGKIALDDFRGQKPVLVGLFRGLHCAFCR RHIAAQARLDPALREKGVESLTVVNTPIERARLYFRYHPMPNLLAASDPERASHRAFGLPNLEFTQDETNWPYKVSMAAA KGMRVDMPGELPGPMDPFAAGEILDKKDPYELTEADEQMMATGHGQLVGQFLLDRQGIVRWSFTEVPEGGRYMFGAPSPQ ELMSAVSQVAQ
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27588; Mature: 27588
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPARARPGSACGAAFSRLAGWEVEMSAPSDLVPLQPGDRAPNVILDAITQEGKIALDDF CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCC RGQKPVLVGLFRGLHCAFCRRHIAAQARLDPALREKGVESLTVVNTPIERARLYFRYHPM CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCHHHHEEEEEECCC PNLLAASDPERASHRAFGLPNLEFTQDETNWPYKVSMAAAKGMRVDMPGELPGPMDPFAA CCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCEEEEEEHHCCCEECCCCCCCCCCCCCHH GEILDKKDPYELTEADEQMMATGHGQLVGQFLLDRQGIVRWSFTEVPEGGRYMFGAPSPQ HHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCHH ELMSAVSQVAQ HHHHHHHHHCC >Mature Secondary Structure MRPARARPGSACGAAFSRLAGWEVEMSAPSDLVPLQPGDRAPNVILDAITQEGKIALDDF CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCC RGQKPVLVGLFRGLHCAFCRRHIAAQARLDPALREKGVESLTVVNTPIERARLYFRYHPM CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCHHHHEEEEEECCC PNLLAASDPERASHRAFGLPNLEFTQDETNWPYKVSMAAAKGMRVDMPGELPGPMDPFAA CCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCEEEEEEHHCCCEECCCCCCCCCCCCCHH GEILDKKDPYELTEADEQMMATGHGQLVGQFLLDRQGIVRWSFTEVPEGGRYMFGAPSPQ HHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCHH ELMSAVSQVAQ HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA